Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 290 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 10/272 (3%)

Query: 17  ILCWAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVALVMGIGRPRLW--DLPWLLVL 74
           ++ W  +   V     S+    LA LR ++A + ++ + L    G P L    L  +   
Sbjct: 5   MVLWGVNVSAVKALTTSFESLPLASLRMVVACLALSAIVLWRRGGVPALGARQLAAMTGC 64

Query: 75  SFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLKERVSLWRWSCVLLGLL 134
           +F  V+ +      G    TA   +++   +PL S L+A    +ER +  R   V LG  
Sbjct: 65  AFLMVYANQILFAQGLLRSTATNGALIMALSPLVSALMAALVFRERFTPRRMLGVALGFA 124

Query: 135 GVLVVIWGDHGVGNIDPRG---LLLLLAAVSWSLYFAIQKHYAHRYSPLTMACYMVWGGT 191
           GV  V+    G G +   G   L+L LA VS+++     +  A +  PL+++  +   GT
Sbjct: 125 GVAAVVLSHPGAG-LSRAGIGDLMLALAVVSFAVGGVGVQRLARQIDPLSISWVIYMIGT 183

Query: 192 LMLCVN-LPGLSSAVVQAPLPEN---LAVLVLGIFPSALAYLAWGYVLKHVEVSRASVAM 247
            ML ++ L G S        P       VL  GI  +A   L W   +  + V+R +V +
Sbjct: 184 AMLVLHTLLGPSRLGTAELFPGAWPWALVLFSGIAATAAGNLIWNRAISVIGVARTAVFL 243

Query: 248 YLIPPVAMMMAATLLGEHITLQVVLGGVIVLA 279
           Y +P   +  AA LLGE +T   + G V V++
Sbjct: 244 YWVPVFGVAFAALLLGEVLTWWHLFGFVAVMS 275



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 14/138 (10%)

Query: 156 LLLAAVSWSLYFAIQKHYAHRYSPLTMACYMVWGGTLMLCVNLPGLSSAV------VQAP 209
           +LLA V W +  +  K     +  L +A       +L + V    LS+ V      V A 
Sbjct: 1   MLLAMVLWGVNVSAVKALTTSFESLPLA-------SLRMVVACLALSAIVLWRRGGVPAL 53

Query: 210 LPENLAVLVLGIFPSALA-YLAWGYVLKHVEVSRASVAMYLIPPVAMMMAATLLGEHITL 268
               LA +    F    A  + +   L     +  ++ M L P V+ +MAA +  E  T 
Sbjct: 54  GARQLAAMTGCAFLMVYANQILFAQGLLRSTATNGALIMALSPLVSALMAALVFRERFTP 113

Query: 269 QVVLGGVIVLASVAAISL 286
           + +LG  +  A VAA+ L
Sbjct: 114 RRMLGVALGFAGVAAVVL 131