Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 293 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 15/284 (5%)

Query: 15  SVILCWAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVALVMGIGRPRLWDLPWL--- 71
           + IL WA + +   M   +  P ++   R+L+A++      L+  + R R    P L   
Sbjct: 8   TAILIWAGNTVVTKMSAGAIHPAEIGFYRWLLAALLFTPF-LLPAVWRNRAAIRPHLAKV 66

Query: 72  LVLSFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLKERVSLWRWSCVLL 131
            VL   G+ ++ +   +     +A    ++    PL S+ ++   L +R+S       ++
Sbjct: 67  FVLGVLGMAMYQSLAYFAAGITSATNMGIILSLMPLMSLALSIAWLGQRLSYGALLGAVV 126

Query: 132 GLLGVLVVIWGDHGVG----NIDPRGLLLLLAAVSWSLYFAIQKHYAHRYSPLTMACYMV 187
              GVL V+   H        ++   LL+L+A ++++LY  + K +  R  P+ +    V
Sbjct: 127 SFFGVLEVVSAGHPASLLQQGLNSGDLLMLVATLAYALYSFLLKKWQLRLPPMQLLYLQV 186

Query: 188 WGGTLMLCVNLPGLSSAVVQAPLPENLA-VLVLGIFPSALAYLAWGYVLKHVEVSRASVA 246
               + + V LP    +        N+  VL   +  S +A L W   +  +  SR ++ 
Sbjct: 187 ---LVAIVVLLPLFLLSDKTGLNSHNIGLVLYACVLASMIAPLVWMQAVHRLGPSRTTLF 243

Query: 247 MYLIPPVAMMMAATLLGEHITLQVVLGGVIVLASVAAISLEGRW 290
             L+P V  ++AA +L E +    ++GG++ LA V    L  RW
Sbjct: 244 FNLLPLVTALIAAVVLDEQLASYHLVGGLLTLAGVV---LAERW 284



 Score = 30.0 bits (66), Expect = 7e-05
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 14/149 (9%)

Query: 154 LLLLLAAVSWSLYFAIQKHYAHRYSPLTMACYMVWGGTLMLCVNLPGLSSAVVQ---APL 210
           L  L A + W+    + K  A    P  +  Y  W   L   +  P L  AV +   A  
Sbjct: 4   LFPLTAILIWAGNTVVTKMSAGAIHPAEIGFYR-W--LLAALLFTPFLLPAVWRNRAAIR 60

Query: 211 PENLAVLVLGIFPSA----LAYLAWGYVLKHVEVSRASVAMYLIPPVAMMMAATLLGEHI 266
           P    V VLG+   A    LAY A G        +   + + L+P +++ ++   LG+ +
Sbjct: 61  PHLAKVFVLGVLGMAMYQSLAYFAAGIT----SATNMGIILSLMPLMSLALSIAWLGQRL 116

Query: 267 TLQVVLGGVIVLASVAAISLEGRWRSVAQ 295
           +   +LG V+    V  +   G   S+ Q
Sbjct: 117 SYGALLGAVVSFFGVLEVVSAGHPASLLQ 145