Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 299 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 76.6 bits (187), Expect = 7e-19
 Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 23/294 (7%)

Query: 16  VILCWAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVALVMGIGRPRL---WDLPWLL 72
           V++ W  + + + +GL +  P  LA LRF++ +        +  + RP++     L + L
Sbjct: 12  VVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAF-----PAIFFVARPKVPLNLLLGYGL 66

Query: 73  VLSFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLKERVSLWRWSCVLLG 132
            +SF        ++N+G   + AG +S++ Q+   F++++  F   ER+   + + + L 
Sbjct: 67  TISFAQFAFLFCAINFG---MPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIALA 123

Query: 133 LLGVLVVIWGDHGVGNIDPRGLLLLLAAV-SWSLYFAIQKHY-AHRYSPLTMACYMVWGG 190
           + GVLV+I       ++   G +L LAA  SW+      K   +H   P  M+  ++W  
Sbjct: 124 IFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSL-VIWSA 182

Query: 191 TLMLC------VNLPGLSSAV---VQAPLPENLAVLVLGIFPSALAYLAWGYVLKHVEVS 241
            + +       + L G ++ +   V   +   L+++ L    + + Y  WG +L   E  
Sbjct: 183 LIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETW 242

Query: 242 RASVAMYLIPPVAMMMAATLLGEHITLQVVLGGVIVLASVAAISLEGRWRSVAQ 295
           R +    L+P V +  AA LL E +T    LG V+++  +       RWR   +
Sbjct: 243 RVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVK 296