Pairwise Alignments

Query, 684 a.a., DNA polymerase III subunit gamma/tau from Pseudomonas simiae WCS417

Subject, 691 a.a., DNA polymerase III, gamma subunit from Pseudomonas putida KT2440

 Score =  987 bits (2552), Expect = 0.0
 Identities = 526/705 (74%), Positives = 568/705 (80%), Gaps = 39/705 (5%)

Query: 1   MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK 60
           MSYQVLARKWRPRSFREMVGQTHVLKALINALD+QRLHHAYLFTGTRGVGKTTIARIIAK
Sbjct: 1   MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK 60

Query: 61  CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF 120
           CLNCETGITSTPCGTCSVC+EIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
Sbjct: 61  CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF 120

Query: 121 KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP 180
           KVYLIDEVHMLS+HSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNM+P
Sbjct: 121 KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP 180

Query: 181 ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM 240
           ERVVEHL+HVL  ENVPFE+DALWLLGRAADGSMRDAMSLTDQAIAFGEGKV+AADVRAM
Sbjct: 181 ERVVEHLSHVLAAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM 240

Query: 241 LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE 300
           LG+LDHGQV+ VL AL+EGDA+ALLEAVR+L+EQGPDW+GVL+E+LNVLHRVAIAQALPE
Sbjct: 241 LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWSGVLAEMLNVLHRVAIAQALPE 300

Query: 301 GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP 360
            VDNG GDR+RVLALA ALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
Sbjct: 301 AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP 360

Query: 361 ADSADAPRQPLKPVGISQATVDSAKPVAGAAVVA---PVVAAPA-PVAPVPE---PEPVV 413
           AD+ DAP+  LKP GISQAT D A  VA AA VA   PV A PA PVA  P+   P P  
Sbjct: 361 ADTDDAPKPVLKPTGISQATADPAGQVAAAAPVALSPPVAAVPAEPVAQAPQLEVPAPAT 420

Query: 414 AAPVVEPEPVVE----------PEP---VVDLPWNDPVDAEVEAEQVPAVEPVLDTTGEQ 460
           A    E E  VE          PEP   VVDLPW +P  A       PA           
Sbjct: 421 ADHEPEAEADVELKAEAEAISVPEPVAEVVDLPWEEPAVAPAPLAAEPA----------- 469

Query: 461 PELTPMPTPTPDSVVPDAPEWVSAPVPEPTVAQVEAATPGIDLDDEPPLDEDYIEPDMDS 520
               P P P P+ V P AP   +    EP       A  G++ DDEPPLDEDY   + D 
Sbjct: 470 ----PEPAPAPEPVAPVAPTQAAPAHDEPPFDPSAYAAVGMERDDEPPLDEDYYGGESDP 525

Query: 521 A-YSYLDDLASEHTAEPAPEPEAE--PAAAPATGLALQWLELFPKLPISGMTGSIAANCT 577
           A +SYLD+LA EH  E   +P AE  PAA PATGLALQWLELFP+LP+SGMTG+IAANCT
Sbjct: 526 AGFSYLDELA-EHVQEDVSKPAAEPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCT 584

Query: 578 LISIDGDHWLLHLDPAHSALFNATQQRRLNDALNQYHERTLSITIELIKPEQETPAQAAT 637
           LI+ DGD WLLHLDP   ALFNATQQRRLN+ALNQ+  RTL++ IELI PEQETPAQAA 
Sbjct: 585 LIAADGDDWLLHLDPGQGALFNATQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAAA 644

Query: 638 RRRINRQREAEDSIHGDPLIQQMMQQFGAVVRHDTIEPVEAPVPQ 682
           R+R  RQ++A  SI  DPLIQQM++ FGA VR DTIEPVEA   Q
Sbjct: 645 RKRAERQQDAVASIEQDPLIQQMIKLFGAKVRQDTIEPVEALASQ 689