Pairwise Alignments

Query, 770 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 826 a.a., putative Transporter from Pseudomonas putida KT2440

 Score = 55.1 bits (131), Expect = 2e-11
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 14/192 (7%)

Query: 212 QVADLLQASRTQASAHGAQLLAASGL--LYAANGQ--QQATREITWVGGGATVGILLLLL 267
           +V D +QA      +  A  L A+G   + AA  Q  +QA R++ W   GA   +++L L
Sbjct: 590 RVVDSVQAFAQANDSEQASFLMAAGSAGIEAATNQVVKQANRDMLWWVYGA---VIVLCL 646

Query: 268 LAFRRWR-VLLAFVPVLVGMLFGAVACVALFGHMHVMTLVLGSSLIGVAVDYPLHYLS-- 324
           + FR WR VL A +P+++  +      VAL   + V TL + +  +G+ VDY L+ +S  
Sbjct: 647 VTFRSWRAVLCAVLPLVLTSILCEALMVALGIGVKVATLPVIALGVGIGVDYALYVMSIV 706

Query: 325 ----KSWSMRPWRSWPALRLTLPGLSLSLATSCIGYLALAWTPFPALTQIAVFSAAGLVG 380
               +  +      + AL  T   + L+  T  IG     ++P      + V  A   V 
Sbjct: 707 LAQLRQGASLSQAYYRALLFTGKVVMLTGITLAIGVGTWIFSPIKFQADMGVLLAFMFVW 766

Query: 381 AYLSAVCLLPAL 392
             + A+ LLPAL
Sbjct: 767 NMVGALILLPAL 778



 Score = 38.1 bits (87), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 12/111 (10%)

Query: 339 RLTLPGLSLSLATSCIGYLALAWTPFPALTQIAVFSAAGLVGAYLSAVCLLPALLK--GV 396
           RL L GL+ +L    +G+  L       +  +AV ++ G+     + + LLP LL   GV
Sbjct: 336 RLFLAGLT-ALLCDAVGFAVLMIIQIQVIQDLAVIASLGVAVLIFTNLILLPVLLSYVGV 394

Query: 397 ELRPAQWPLRIAE---------CLWRVRESLLKRVPSPVLLALVLLFCAGG 438
             R A+  LR  E          +WR  +   +R  +   +A+  L  AGG
Sbjct: 395 SARAARRSLRAEEAEASGAGKHAVWRFLDLFTRRRWAAACIAVAALMAAGG 445