Pairwise Alignments

Query, 315 a.a., cytochrome Cbb3 from Pseudomonas simiae WCS417

Subject, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score =  471 bits (1213), Expect = e-138
 Identities = 222/325 (68%), Positives = 254/325 (78%), Gaps = 14/325 (4%)

Query: 1   MTLFWSTWICVLTLGSLIGLTWLLVGTRKGETKGSVDQTMGHAFDGIEEYDNPLPQWWFM 60
           MT FWS ++ VLTLG++  LTWLL+ TRKG+ +   D+T+GHAFDGIEEYDNPLPQWWF 
Sbjct: 1   MTTFWSLYVTVLTLGTIFSLTWLLLSTRKGQREEVTDETVGHAFDGIEEYDNPLPQWWFW 60

Query: 61  LFAGTLVFAVGYLILYPGLGNWKGVLPGY--------------QDGWTQTKEWDKEMVKA 106
           LF GT+VFA+GYL+LYPGLGNWKGVLPGY              Q GWT   EW+KEM KA
Sbjct: 61  LFVGTIVFALGYLVLYPGLGNWKGVLPGYSYLDNDKQTEFSNGQPGWTGVHEWEKEMAKA 120

Query: 107 DAKFGPIFAKFSAMPVEEVAKDPQALKMGGRLFASNCAVCHGSDAKGAFGFPNLADNIWR 166
           DA+FGPIFAKF+AMP+EEVAKDPQALKMG RLFASNC+VCHGSDAKGAFGFPNL DN WR
Sbjct: 121 DARFGPIFAKFAAMPIEEVAKDPQALKMGARLFASNCSVCHGSDAKGAFGFPNLTDNDWR 180

Query: 167 WGGSAEAIKTTILNGRHAAMPAWGDMLGDEGVKNVAAYVRHDVAKLPLPADSTADLAAGQ 226
           WGG  E IKTTI+ GRH  MPAW +++GD+GV +VAA+V   +    LP  + AD+  GQ
Sbjct: 181 WGGEPETIKTTIMAGRHGVMPAWAEVIGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQ 240

Query: 227 TAFNTTCVACHGPEGHGMEAMGAPDLTKPAGYIYGTSLAQLQQTIRHGRQGQMPAQEVLQ 286
             F   CVACHGPEG G  AMGAP+LT P  +IYG+S AQLQQTIR+GRQGQMPAQE LQ
Sbjct: 241 KIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQ 300

Query: 287 GNDKVHLLAAYVYSLSHNADGATPE 311
           GNDKVHLLAAYVYSLSH A+ A  E
Sbjct: 301 GNDKVHLLAAYVYSLSHQAEPAKAE 325