Pairwise Alignments

Query, 474 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

Subject, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 22/261 (8%)

Query: 157 IYVGNWFFGAFIITVAILHIVNNLEIPVSL-----TKSYSLYGGATDAMVQ---WWYGHN 208
           ++V  W   AF++ +A++ ++      + +     T  +S  GG    + Q   W++GH 
Sbjct: 199 LFVWTWLITAFLL-IAVMPVLAGCVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHP 257

Query: 209 AVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFW---ALITLYIWAGPHHLHYTALP 265
            V   +   F G +   +P  + +P++ Y  S+V+     A ++  +WA  HH+    +P
Sbjct: 258 EVYIMILPAF-GAVSSIIPTFSRKPLFGY-TSMVYATASIAFLSFIVWA--HHMFVVGIP 313

Query: 266 DWAQSLGMVMSLVLLAPSWGGMINGMMTLSGAWH-KLRSDPILRFLVVSLAFYGMSTFEG 324
              +   M  +L++  P+   + N + T+   W   L  +  + F V  +  + +  F G
Sbjct: 314 LVGELFFMYATLLIAVPTGVKVFNWVSTM---WQGSLTFETPMLFAVAFVILFTIGGFSG 370

Query: 325 PMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHMIPKVFGREQMYSLGLINAH 384
            M+AI   +   H T + + H H   +         + Y+ +PK  G   MY   L   H
Sbjct: 371 LMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTG--HMYDETLGKLH 428

Query: 385 FWLATIGTVLYIASMWVNGIA 405
           FWL+ +G  +    M   G+A
Sbjct: 429 FWLSFVGMNMAFFPMHFVGLA 449



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 17/73 (23%), Positives = 27/73 (36%)

Query: 338 YTDWTIGHVHAGALGWVAMISIGALYHMIPKVFGREQMYSLGLINAHFWLATIGTVLYIA 397
           +   T  H      G V    +G    MIP + G   M    + N  FWL     +L ++
Sbjct: 72  FNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVS 131

Query: 398 SMWVNGIAQGLMW 410
           +++  G      W
Sbjct: 132 TLFTPGGGPNFGW 144