Pairwise Alignments

Query, 474 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

Subject, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

 Score = 71.2 bits (173), Expect = 8e-17
 Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 20/260 (7%)

Query: 157 IYVGNWFFGAFIITVAILHIVNNLEIPVSL-----TKSYSLYGGATDAMVQ---WWYGHN 208
           ++V  W   AF++ +A++ ++  +   + +     T  +S  GG    + Q   W++GH 
Sbjct: 200 LFVWTWLITAFLL-IAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHP 258

Query: 209 AVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWAL--ITLYIWAGPHHLHYTALPD 266
            V   +   F G +   +P  + +P++ Y   +    A+  ++  +WA  HH+    +P 
Sbjct: 259 EVYIMILPAF-GAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWA--HHMFVVGIPV 315

Query: 267 WAQSLGMVMSLVLLAPSWGGMINGMMTLSGAWH-KLRSDPILRFLVVSLAFYGMSTFEGP 325
             +   M  ++++  P+   + N + T+   W   L  +  + F +  +  + +  F G 
Sbjct: 316 VGELFFMYATMLIAVPTGVKVFNWVSTM---WEGSLTFETPMLFAIAFVILFTIGGFSGL 372

Query: 326 MMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHMIPKVFGREQMYSLGLINAHF 385
           M+AI   +   H T + + H H   +         + Y+ +PK  G   MY   L   HF
Sbjct: 373 MLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTG--HMYDETLGKLHF 430

Query: 386 WLATIGTVLYIASMWVNGIA 405
           WL+ +G  +    M   G+A
Sbjct: 431 WLSFVGMNMAFFPMHFVGLA 450



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 17/73 (23%), Positives = 27/73 (36%)

Query: 338 YTDWTIGHVHAGALGWVAMISIGALYHMIPKVFGREQMYSLGLINAHFWLATIGTVLYIA 397
           +   T  H      G V    +G    MIP + G   M    + N  FWL     +L ++
Sbjct: 73  FNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVS 132

Query: 398 SMWVNGIAQGLMW 410
           +++  G      W
Sbjct: 133 TLFSPGGGPNFGW 145