Pairwise Alignments

Query, 474 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

Subject, 632 a.a., Heme/copper-type cytochrome/quinol oxidases, subunit 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 72.4 bits (176), Expect = 4e-17
 Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 9/205 (4%)

Query: 203 WWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALITLYIWAGPHHLHYT 262
           W+ GH  V   L    LG+    +   + +P++ Y+  I+    +  L      HH+  +
Sbjct: 291 WFLGHPEVYIVLLPA-LGITSEVIATNSRKPIFGYKAMILSMLGITVLSFVVWAHHMFVS 349

Query: 263 ALPDWAQSLGMVMSLVLLAPSWGGMINGMMTLSGAWH-KLRSDPILRFLVVSLAFYGMST 321
            +  +  S+ M ++L++  PS   + N + TL   W   L   P + F +  ++F+    
Sbjct: 350 GMNPFLGSIFMFLTLIIAVPSAVKVFNYLTTL---WRGNLVFTPAMLFSIGLVSFFISGG 406

Query: 322 FEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGA-LYHMIPKVFGREQMYSLGL 380
             G  +    V+   H T + + H H   +G  +   + A +YH  PK+FG+     LG 
Sbjct: 407 LTGIFLGNSAVDIQLHDTYFVVAHFHL-VMGSASFFGLMAGVYHWFPKMFGKMMDAKLGY 465

Query: 381 INAHFWLATIGTVLYIASMWVNGIA 405
           I  HFWL  +G  +    M   GIA
Sbjct: 466 I--HFWLTFVGVYMVFFPMHYIGIA 488



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 15 RQFAIMTVVWGIVGMGLGVFLAAQLVWPALN 45
          +QF +  +VW ++G  L +    QL +P ++
Sbjct: 42 KQFLVTGIVWALIGGFLSILFRLQLGFPDMD 72