Pairwise Alignments

Query, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  208 bits (530), Expect = 3e-58
 Identities = 151/441 (34%), Positives = 229/441 (51%), Gaps = 30/441 (6%)

Query: 70  WSTLKQG-LPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTAEQIRRAEA 128
           W T K+G +P +             WV     PVF  N ++G         AE + R + 
Sbjct: 70  WLTFKRGQIPQLADQDLSALGSATGWVEFNPMPVFGDNPLLG---------AEVVARPDG 120

Query: 129 LYHRINQGKSAIPQRDKWLPVLQDWLPFILVSQLSFMIGASLNSHWGFALAAGLSVPLGL 188
            Y  +     ++ Q   +     ++   +L+  L+ M+GAS                L +
Sbjct: 121 QYIAVLAYAPSLSQ--VFEERFANYAVAVLILMLA-MLGAS---------------QLLI 162

Query: 189 LGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQEARLKTCLTRLQD 248
             L  Q   LK ++   E+T    L A++    +    ++  +  + +A  +  +  +  
Sbjct: 163 RFLLSQLNTLKDVMLHVEKTGD--LSARVPLACKDEVGQMASAFNAMQAGYQRVVNTVAH 220

Query: 249 TAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQE 308
           TA  L+D AA+  +  +    G+  Q+ ET+Q ATA+N+M AT   +A H   T D +Q 
Sbjct: 221 TARQLDDGAARLASSMNEVQHGMLGQQSETDQAATAINEMTATVHHIAQHAGATRDLSQT 280

Query: 309 ANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDEIGGVVDVIKGIADQTNLL 368
           A+ L G G+++    + +I  LS  V +T V + +LA+DS +I GVV VI  IA+QTNLL
Sbjct: 281 ADTLAGSGQEVVTRVQRSIAGLSTGVQQTAVMIQKLAEDSQKINGVVSVIHSIAEQTNLL 340

Query: 369 ALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHALIAKLQQTAAAAVQTMDAG 428
           ALNAAIEAARAGEMGRGFAVVADEVR LA+R   ST +I  +++ LQ     AV  M   
Sbjct: 341 ALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQSSTDEITRMVSALQAGTRDAVDFMQES 400

Query: 429 HRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQSSVAEEISRNISTIALLA 488
             +A++ V +  EA  AL  I+ AVA + +  TQIA A E+QS VAEE++R + +I  + 
Sbjct: 401 SFKADDCVHQAQEAGAALAEITGAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVT 460

Query: 489 DQTSEQAMNSAQLSEELTHTA 509
           + T +Q ++SA  S +L   A
Sbjct: 461 ENTVQQTVDSATTSNQLATLA 481



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 15/88 (17%)

Query: 256 QAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEV-----------ASHVQRTAD 304
           QA ++       +  + + R    Q+A A  Q +   +E+            + VQ+T D
Sbjct: 410 QAQEAGAALAEITGAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTVD 469

Query: 305 ATQEANRLTGRGRDIAGETREAIQRLSV 332
           +   +N+L      +AGE  +AI +L +
Sbjct: 470 SATTSNQLA----TLAGELSKAIGQLKL 493