Pairwise Alignments

Query, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  479 bits (1232), Expect = e-139
 Identities = 269/530 (50%), Positives = 351/530 (66%), Gaps = 18/530 (3%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSRDELVRAPHNLVRHPD 60
           MR N PVT+ ERTFP  QRLISTTD    ITYCNDAFV ISGF+ DELV  PHNLVRHPD
Sbjct: 1   MRMNLPVTEHERTFPGDQRLISTTDLDSRITYCNDAFVAISGFTYDELVGQPHNLVRHPD 60

Query: 61  VPPAVFAHMWSTLKQGLPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTA 120
           +PPAVF HMW T+KQG PWMGIVKNR K GD+YWV+AYVT ++E  ++ GYESVR  PT 
Sbjct: 61  MPPAVFGHMWETIKQGKPWMGIVKNRAKNGDYYWVSAYVTAIYEQGRISGYESVRSVPTR 120

Query: 121 EQIRRAEALYHRINQGKSAIPQRDKWLPVLQDWLPFILVSQLSFMIGASLNSHWGFALA- 179
           EQIRRAEALY R+  G+S +P   +    L    P         +IGA L S  G+    
Sbjct: 121 EQIRRAEALYARLRDGRSPVPWAARLGHGLGHGWP---------LIGAGLLSAAGYLWLP 171

Query: 180 --AGLSVPLGLLGLSW------QQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMS 231
             A L+V +  L L+W      Q + ++R L    +  + PL+A  Y+D+ G + +L+++
Sbjct: 172 PYAALAVLMASLLLAWYWVEHRQNQAIRRTLAEHPKAFTSPLVALTYSDNPGLKGQLDLA 231

Query: 232 ILSQEARLKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAAT 291
           I+S+EARL+T LTRL D    +  +AAQS+ L+   +  L+RQR ET+Q ATA+ QMAAT
Sbjct: 232 IISEEARLQTALTRLVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAAT 291

Query: 292 TQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDEI 351
            Q+V  +VQ TA A  +A++L  +G ++A ++ + +  +S AV + G  V  LA+ +  I
Sbjct: 292 IQQVTHNVQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSI 351

Query: 352 GGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHALI 411
           G VVDVI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT  ST +IH +I
Sbjct: 352 GSVVDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHII 411

Query: 412 AKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQS 471
           A L+  A  AV T   G + + + V  V     AL GI+ AV+ IT M+ Q+A A+E+QS
Sbjct: 412 ASLRAGAERAVSTASRGEQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQS 471

Query: 472 SVAEEISRNISTIALLADQTSEQAMNSAQLSEELTHTANTQYSLVERFNR 521
            VAE+I++ I  IA L DQ++ QA   A++S++L   A   +SL ERFNR
Sbjct: 472 HVAEDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAERFNR 521