Pairwise Alignments

Query, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  443 bits (1139), Expect = e-129
 Identities = 255/527 (48%), Positives = 335/527 (63%), Gaps = 12/527 (2%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSRDELVRAPHNLVRHPD 60
           MR N PVT  E+ FP  QRLIS TD   +ITYCN  F  ISG+S  EL+ +PHNLVRHPD
Sbjct: 1   MRLNLPVTPVEQRFPPHQRLISATDTASLITYCNPEFAAISGYSEAELIGSPHNLVRHPD 60

Query: 61  VPPAVFAHMWSTLKQGLPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTA 120
           +PPAV+  MW  LK G  WMGIVKNRC+ GD+YWVNAYVTP+ EG +VVGYESVR+ PT 
Sbjct: 61  MPPAVYELMWRYLKAGKSWMGIVKNRCRNGDYYWVNAYVTPILEGGRVVGYESVRVCPTR 120

Query: 121 EQIRRAEALYHRINQGKSAI--PQRDKWLPVLQDWLPFILVSQLSFMIGASLNSHW---- 174
           EQ+ RAEALY R+  G++A+  P+R   L +L   L   L   L   +    N  W    
Sbjct: 121 EQVARAEALYARLRNGQAALSAPRR---LSLLAQALALPLAGGL---LAVGANHLWPGLV 174

Query: 175 GFALAAGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILS 234
           G  L  GL V  GL   +   R L+++++ AE   +DP+ A  Y+D  GA  +L++ ++S
Sbjct: 175 GQGLTLGLFVACGLWVRNALGRQLQQIVQGAEGAFADPIAALTYSDLSGAAGQLQLMLIS 234

Query: 235 QEARLKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQE 294
           +EARLKT LTRL D A  +   A  +  L+ ++ + L  QR ET+  ATA+NQMAA+  E
Sbjct: 235 EEARLKTALTRLSDLAGQMAVAARDAGQLSRSTEAALLEQRAETDLSATAMNQMAASIGE 294

Query: 295 VASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDEIGGV 354
           VA+HVQ TA     A+ L  +G  +A  +  AI+ L+  V +    V+ LA  +  I   
Sbjct: 295 VANHVQLTAAEAHTAHLLAEQGSQVADASGAAIRNLASTVTQINQAVSHLAGQTGAIAEA 354

Query: 355 VDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHALIAKL 414
             +I+GIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T +ST  I A+I  L
Sbjct: 355 AGMIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALADKTRQSTLHIQAIIDAL 414

Query: 415 QQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQSSVA 474
           +  A  AV     G   AE+GVA+V EA QAL GI +AV  I+DM+ Q+A A+++QS+VA
Sbjct: 415 RSGAEEAVAIASRGIDGAEQGVAQVQEARQALHGIRDAVQRISDMSQQMATASQQQSAVA 474

Query: 475 EEISRNISTIALLADQTSEQAMNSAQLSEELTHTANTQYSLVERFNR 521
           E++SR I+ +A +A  ++  A  +A    EL H      +LVERFNR
Sbjct: 475 EDVSRQINGVAGIAQHSAHSANAAASRGTELEHVCAGLRALVERFNR 521