Pairwise Alignments

Query, 286 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 307 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 16/224 (7%)

Query: 66  RPG----KPLLYAAATGLVLLGAYQIFYLLALNLSVTPGVMATIMGVQPILTVVL----M 117
           RPG       L A A+G+ ++G + + +      S+  G    +  VQP + V L    +
Sbjct: 59  RPGVISRTAFLLAIASGVAIVGNWLLLFASYARASIAIGT--AVYNVQPFMLVGLAALFL 116

Query: 118 ERQRSLSRMFGLTLGLAGLIMVVY-QGIGLSGMS--LAGMLFGLLALASMTFGSIMQKRI 174
             + +L+++  L++   G++ +V   G G S     L G+   L A       +++ KR+
Sbjct: 117 GEKITLAKVTWLSVAFLGMLAIVSAHGAGQSNGEDYLLGIALALGAAFLYAIAALIIKRL 176

Query: 175 TDNPLGTLP-VQYLAGLLLCSVFVPFQPFHFEYSSSFYLPVLWMGLVVSLLATLLLYRLI 233
           +  P   +  +Q   G+LL + +V       E  +   L  L +G+V + L  +LLY  I
Sbjct: 177 SGTPPHLIALIQVTTGVLLLAPWVTLGGLPVEVPALASL--LTLGMVHTGLMYVLLYSAI 234

Query: 234 ARGNLVNVTSLFYLVPAVTAVMDYLIFGNRLAMLSVLGMGLIIV 277
            R       +L ++ P    ++D++ FG+RLA L  LG+GLI++
Sbjct: 235 QRLPTALTGALSFIYPIAAILVDWVAFGHRLAPLQWLGVGLILL 278



 Score = 23.5 bits (49), Expect = 0.006
 Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 37/221 (16%)

Query: 92  ALNLSVTPGVMATIMGVQPILTVVLME------RQRSLSRMFGL----TLGLAGLIMVVY 141
           A+ +S T G    + G QP+L VV            ++   FG      +     ++ + 
Sbjct: 15  AMLISGTIGWFVLVSG-QPVLDVVFWRCVFGAVTLLAICAAFGFLRPGVISRTAFLLAIA 73

Query: 142 QGIGLSGMSLAGMLFGLLALASMTFGS----------------IMQKRITDNPLGTLPVQ 185
            G+ + G  L  +LF   A AS+  G+                 + ++IT   +  L V 
Sbjct: 74  SGVAIVGNWL--LLFASYARASIAIGTAVYNVQPFMLVGLAALFLGEKITLAKVTWLSVA 131

Query: 186 YLAGLLLCSVFVPFQPFHFEYSSSFYLPVLWMGLVVSLLATLLLYRLIARGNLVNVTSLF 245
           +L  L + S     Q    +Y     L +      +  +A L++ RL   G   ++ +L 
Sbjct: 132 FLGMLAIVSAHGAGQSNGEDYLLGIALAL--GAAFLYAIAALIIKRL--SGTPPHLIALI 187

Query: 246 YLVPAVTAVMDYLIFGNRL----AMLSVLGMGLIIVGLVFV 282
            +   V  +  ++  G       A+ S+L +G++  GL++V
Sbjct: 188 QVTTGVLLLAPWVTLGGLPVEVPALASLLTLGMVHTGLMYV 228