Pairwise Alignments

Query, 279 a.a., sugar ABC transporter permease from Pseudomonas simiae WCS417

Subject, 264 a.a., Lipopolysaccharide ABC export system, permease protein from Pseudomonas putida KT2440

 Score =  128 bits (321), Expect = 1e-34
 Identities = 74/266 (27%), Positives = 136/266 (51%), Gaps = 5/266 (1%)

Query: 14  LLRSLWVNRQLIAQMTRREVIGRYKGSFLGLGWSFLNPLLMLAVYTFVFSVVFRSRWGIA 73
           +++ +W  R  I    + E I R+  S LG  W  ++PL  +A+Y  + S V       A
Sbjct: 4   MIKGIWSYRGFIISSIKNEFISRFARSKLGGLWMIIHPLAQVAIYALILSNVLA-----A 58

Query: 74  ESGGEESKAMFAVVLFVGMIVYGLFAEILNRAPSLIVGNVNYVKKVVFPLEILPVVAACA 133
           +  G ++K  +A+ L  G++ + LFAEI++R  +L +   N +KK+ FP   LPV+   +
Sbjct: 59  KLPGIDNKYAYALYLMAGILAWNLFAEIVSRCLTLFIEQGNIMKKMRFPRITLPVIVVGS 118

Query: 134 ALFHALVSLTVWLMAYTLLIGVPHWHVLFLPLVLFPLLVLALGLAWFLAALGVFLRDVGQ 193
            L + ++     ++ ++LL   P   +L+L  ++  ++ L++G+   L  L VFLRDVGQ
Sbjct: 119 CLLNNVLLFAAVMLVFSLLGHYPTLQILWLIPLVMIVVALSVGIGLVLGILNVFLRDVGQ 178

Query: 194 TVAIITTMMMFLAPVFFPVKNLPPEFQPLIMANPLTFIIEQSRDVLIWGKMPDFMGLLNY 253
            V I+  ++ +  P+ + V  +P   +  +  NP+  I+    DVL++ K PD    +  
Sbjct: 179 VVPIVLQVLFWFTPIVYMVNVIPEHLRATLSFNPMYPIVTAYHDVLLYAKAPDLSQAVVM 238

Query: 254 FIVALVMFWAGYIWFQKMRKGFSDVL 279
             ++  +   G   F++      DVL
Sbjct: 239 TGISFGLLLLGLFLFRRSVPEMVDVL 264