Pairwise Alignments

Query, 454 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 314 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  111 bits (277), Expect = 4e-29
 Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 25/297 (8%)

Query: 33  RRKQYFREFWALRDISFVVRKGETVGIIGRNGSGKSTLLQIICGTLTPTAGDVQTSG--- 89
           R ++ + E   + D+SF +  GE +G+IG NG+GK+T +++  G   P  G++   G   
Sbjct: 16  RLRKRYGETTVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCLGLTAPDGGEISALGLQM 75

Query: 90  -----RVAALLELGSGFN---PDFSGRENVYMNAAVLGLSREETDARFSQIEAFAEIGNF 141
                 + A L + S F+   PDFS  EN+ +     G  + +  AR  Q+  FA + + 
Sbjct: 76  PRDALAIKAQLGVVSQFDTLDPDFSCAENLVVYGRYFGFGKAQVRARVPQLLEFAALSHK 135

Query: 142 IDQPVKSYSSGMMVRLAFAVAINVDPQILIVDEALSVGDELFQRKCFARIEAIKANGATI 201
            D      S GM  RL+ A A+  DP++L++DE  +  D   +   + R++ +   G +I
Sbjct: 136 ADAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQARHLMWERLQVLLQQGKSI 195

Query: 202 LFVSHSGSAVVELCDRAILLDNGDKLTEGAPKNVIGKYQKLLYAPAEKVEGIRAAVSAEG 261
           L  +H       LC R ++LD+G K+ EG P+++I          AE +E     V   G
Sbjct: 196 LLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLI----------AEHLEPDVVEVYGNG 245

Query: 262 DVSLSTLNSIAGANAHASSKNTTDDVEEFYDPHLKSQSELAYESHGAVINLPQIVNL 318
            +SL+     A   A A+    + +   FY    +   E A   HG +    +  NL
Sbjct: 246 ALSLA---ESAELKAMAARVEVSGETVFFYTQDARRLLE-ALTRHGGLRTFHRPANL 298