Pairwise Alignments

Query, 454 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 916 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score = 83.6 bits (205), Expect = 3e-20
 Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 13/213 (6%)

Query: 38  FREFWALRDISFVVRKGETVGIIGRNGSGKSTLLQIICGTLTPTAG------------DV 85
           F +F A+  +SF +R+GE  G +G NG GKST ++++ G L  T G            D+
Sbjct: 289 FGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGKAWLFGNAVDPDDM 348

Query: 86  QTSGRVAALLELGSGFNPDFSGRENVYMNAAVLGLSREETDARFSQIEAFAEIGNFIDQP 145
            T  RV  + +  S +  + + R+N+  +A +  + RE+  AR +++    ++G  +++ 
Sbjct: 349 STRKRVGYMSQAFSLYT-ELTVRQNLEFHAHLFHVPREDIPARVAEMADRFDLGPVMEEL 407

Query: 146 VKSYSSGMMVRLAFAVAINVDPQILIVDEALSVGDELFQRKCFARIEAIKANGATILFVS 205
             S   G+  RL+ AVA+   P++LI+DE  S  D + +   +  +  +       +F+S
Sbjct: 408 PDSLPLGIRQRLSLAVAMVHKPELLILDEPTSGVDPVARDGFWRLLAELSRRDKVTIFIS 467

Query: 206 HSGSAVVELCDRAILLDNGDKLTEGAPKNVIGK 238
                    CDR  ++  G  L   AP  +I K
Sbjct: 468 THFMNEAMRCDRMSMMHAGHVLDSDAPARLIEK 500



 Score = 69.7 bits (169), Expect = 4e-16
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 16/212 (7%)

Query: 43  ALRDISFVVRKGETVGIIGRNGSGKSTLLQIICGTLTPTAGDVQTSG------------- 89
           ALR I   +  G  +G+IG +G GKS+LL ++ G      GDV   G             
Sbjct: 30  ALRGIDLDIPGGRMIGLIGPDGVGKSSLLSLVAGAHVIQDGDVYVLGGDMRDKRHRSDVC 89

Query: 90  -RVAALLE-LGSGFNPDFSGRENVYMNAAVLGLSREETDARFSQIEAFAEIGNFIDQPVK 147
            R+A + + LG    P  S  EN+     + G    E   R   +     +  F+ +P  
Sbjct: 90  PRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGHDGAERRRRIDALTRATGLDPFLARPAG 149

Query: 148 SYSSGMMVRLAFAVAINVDPQILIVDEALSVGDELFQRKCFARIEAIKANGATI-LFVSH 206
             S GM  +L    A+  DP +LI+DE  +  D L + + +  I  I+   A + + V+ 
Sbjct: 150 KLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLINDIRQTQAQMSVIVAT 209

Query: 207 SGSAVVELCDRAILLDNGDKLTEGAPKNVIGK 238
           +     +  D  + +D+G  L  G P  +  +
Sbjct: 210 AYMDEAQRFDWLVAMDDGQILDTGTPAEIFAR 241