Pairwise Alignments

Query, 454 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 405 a.a., Lipopolysaccharide ABC export system, ATP-binding protein from Pseudomonas putida KT2440

 Score =  238 bits (606), Expect = 3e-67
 Identities = 146/394 (37%), Positives = 208/394 (52%), Gaps = 40/394 (10%)

Query: 7   IKVNAVSKCFHIYDNPRDRFLQMFNGRRKQYFREFWALRDISFVVRKGETVGIIGRNGSG 66
           + V+ V K +  Y +   R    F    K    E W L+ I+F +  GE +GIIG+NG+G
Sbjct: 4   LSVSDVGKAYKTYRSELQRIAHWFFLPTKAS-SEHWVLKHINFAIEPGEAIGIIGQNGAG 62

Query: 67  KSTLLQIICGTLTPTAGDVQTSGRVAALLELGSGFNPDFSGRENVYMNAAVLGLSREETD 126
           KSTLL++I GTL PT G VQ +GR+AA+LELG GFNP+ SGR+NVY  A ++G   ++ +
Sbjct: 63  KSTLLKMITGTLQPTQGRVQVNGRIAAILELGMGFNPELSGRQNVYHAAGLMGFDVQQIN 122

Query: 127 ARFSQIEAFAEIGNFIDQPVKSYSSGMMVRLAFAVAINVDPQILIVDEALSVGDELFQRK 186
                IEAFAEIG + D+ V++YSSGM +R+AFAVA    P+ILIVDEALSVGD  FQ K
Sbjct: 123 DVIDDIEAFAEIGEYFDEAVRTYSSGMQMRVAFAVATAFRPEILIVDEALSVGDSYFQHK 182

Query: 187 CFARIEAIKANGATILFVSHSGSAVVELCDRAILLDNGDKLTEGAPKNVIGKYQKLLYAP 246
            F RI   +  G ++L VSH   A+  LC RA+LL+NG  + +G P+ V+  Y  L+   
Sbjct: 183 SFERIREFQRLGTSLLIVSHDRGAIQSLCSRALLLENGSIIKDGPPEQVMDYYNALI--- 239

Query: 247 AEKVEGIRAAVSAEGDVSLSTLNSIAGANAHASSKNTTDDVEEFYDPHLKSQSELAYESH 306
                                          A  +N+T  V++  D  +++QS     S 
Sbjct: 240 -------------------------------AEKENSTVQVKQLADGTVQTQS----GSG 264

Query: 307 GAVINLPQIVNLAGEPVNCLARGRTYRYTYKTDFSVAATGVRFGMMIKTLAGVELGGAAT 366
            A I    + ++ G PV  +A G     + + +       +  G +IK   G  + G  T
Sbjct: 265 EATIGTVALYDMQGTPVEFVAVGDKVTLSVQVEVHAPIPELVVGYVIKDRLGQHVFGTNT 324

Query: 367 ATSPQDAVSYVSPGTIIQVEFAFECNLNPGTYFV 400
               + A   +  G  ++  F FE NL PG+Y V
Sbjct: 325 HHLGK-AQKALETGEKLEYRFDFEMNLGPGSYSV 357