Pairwise Alignments

Query, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 319 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score =  178 bits (451), Expect = 2e-49
 Identities = 106/267 (39%), Positives = 152/267 (56%), Gaps = 11/267 (4%)

Query: 9   LLGLAAIWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMRVSWDFQGKFRTVL 68
           L+ L A+WGASFLFMRI A E G +P A  RV+IA+  LL I  +          ++   
Sbjct: 29  LVLLGALWGASFLFMRIGAAEFGALPAAAVRVAIASLFLLPIALLRGQGPTIAKHWKASF 88

Query: 69  LLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSKIAGVCLG 128
            +GV NSG+P  ++  A  ++ +G +A+ NATTP+ G L+   +F ER   S+I G+ +G
Sbjct: 89  AVGVFNSGLPFALFCFALLSINSGLAAVLNATTPMFGALVAWAWFRERPAGSRIVGLVIG 148

Query: 129 LFGVGVL-TRAGPV---AFDLELLTGALACLLATTCYGFAGFLARRWLDQRGGLDSRLSA 184
             GV +L +R+  V   A     L   LACL A  CYG +    RR L   GG+ +  +A
Sbjct: 149 FAGVAMLASRSAGVHAGATGHAALWAVLACLGACLCYGISASATRRHL---GGVPALTTA 205

Query: 185 LGSMLGATLFLLPFFAYSAISQPPASWGGWQVWGSLLGLGLVCTAFAYILYFRLLTSIGP 244
            GS +GATLFL    A  A    P      + W +LL LG+ CT  AYIL+FRL+   GP
Sbjct: 206 TGSQIGATLFL----AIPAFMLWPTQMPSLRAWLALLALGIACTGIAYILFFRLIERAGP 261

Query: 245 VKSMTVTFMIPPFGVLWGALLLGEPLS 271
            +++TVTF++P F + +GA+ L E ++
Sbjct: 262 ARALTVTFLVPVFALFYGAVFLDEHIT 288