Pairwise Alignments

Query, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 64/274 (23%), Positives = 110/274 (40%), Gaps = 12/274 (4%)

Query: 7   LYLLGLAAIWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMRVS-WDF-QGKF 64
           L L+     WG + +  ++    I  +   F R  +A A +  I     +  W   + + 
Sbjct: 14  LALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAISVPQLIKDWPVVKQRL 73

Query: 65  RTVLLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSKIAG 124
               +LG +           A Q   A  +A+  A  P++  ++  + F  R+   +IAG
Sbjct: 74  PYFFVLGSVGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIFVLNFVLFRTRVLFGQIAG 133

Query: 125 VCLGLFGVGVLTRAG-PVAF-DLELLTGALACLLATTCYGFAGFLARRWLDQRGGLDSRL 182
            CL + GV +L   G P++   LE+  G    LLA   Y     + R W   +  +D R 
Sbjct: 134 FCLTISGVALLASHGDPLSLLQLEMNVGDAVMLLAVLVYAIYTVILR-W---KPAVDWRT 189

Query: 183 SALGSMLGATLFLLPFFAYSAISQPPASWGGWQVWGSLLGLGLVCTAFAYILYFRLLTSI 242
                   A L  +P   +  +S+    W   + W  ++  G+  +  A ILY + +  I
Sbjct: 190 LMAIPAFFALLTSVPLVFFE-MSRESLIWPDQKGWMLVVYAGIFASLIAQILYIKGVEQI 248

Query: 243 GPVKSMTVTFMIPPFGVLWGALLLGEPLSMAHVY 276
           G  ++     ++P FG L    +L E L   H Y
Sbjct: 249 GANRAGLFINLVPVFGTLLSVFVLSETL---HTY 279