Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  308 bits (788), Expect = 5e-88
 Identities = 173/391 (44%), Positives = 252/391 (64%), Gaps = 7/391 (1%)

Query: 151 RLAPQGVILNKSLTDMITFNQSGVQTAVDSAAQTYSSAQWIVGSIIVLALTATLLLAWLL 210
           R+  QG +L ++ + M+T +Q+ V+ A  + A+T      ++    VLAL   LL AW +
Sbjct: 255 RMVEQGTVLLQA-SQMMTASQTEVRDAAAAQAKT------LLTVATVLALALGLLAAWAI 307

Query: 211 TRSITAPLGQALIVARTIASGDLSQPIAVSGKDEPAQLLTALATMQAQLQGTLRGISESA 270
           TR I  PL Q L  A  +ASGDL+Q + V  +DE  QL  ++  M   L+  + GI +  
Sbjct: 308 TRQIIIPLRQTLRAAERVASGDLTQSLQVQRRDELGQLQASMHRMTQGLRELIGGIGDGV 367

Query: 271 QQLGCAAEEMSSVMEQSTRDLQAQNDEIEQAATAVTEMSAAVDEVAGNAVSSAEASQASD 330
            Q+  AAEE+S+V EQ++  +  Q  E +Q ATA+ +M+A V EVA NA  ++EA+  +D
Sbjct: 368 TQIASAAEELSAVTEQTSAGVNNQKVETDQVATAMNQMTATVHEVARNAEQASEAALMAD 427

Query: 331 EDSKHGHYQISETISSIQNLVDEVLGASNKAEGLAVQAQDISKVLEVIRGIAAQTNLLAL 390
           + ++ G   + E ++ I+ L  EV+ +S     L  ++  I  VL+VI+ +A QTNLLAL
Sbjct: 428 QQAREGDRVVGEAVAQIERLASEVVNSSEAMNLLKTESDKIGSVLDVIKSVAQQTNLLAL 487

Query: 391 NAAIEAARAGEAGRGFAVVADEVRSLAQRTQDSTEEIEQMITGIQQGTQGTVEALNSSAE 450
           NAAIEAARAGEAGRGFAVVADEVRSLAQRTQ STEEIE++I G+Q GTQ     +++S +
Sbjct: 488 NAAIEAARAGEAGRGFAVVADEVRSLAQRTQQSTEEIEELIAGLQSGTQRVASVMDNSRQ 547

Query: 451 QAGHTLQRANSAGSALEKITAAISQISQRNLVIASAAEQQALVARDVDRSLVNIRDLSTQ 510
               +++    AGS+LE IT  +S I   N  IA+AAE+Q  VA +++RS++N+RD+S Q
Sbjct: 548 LTDSSVELTRRAGSSLETITRTVSSIQAMNQQIATAAEEQTAVAEEINRSVMNVRDISDQ 607

Query: 511 TAAGATQTSAASQELSRLAVDLNGLVARFVL 541
           T+A + +T+++S EL+RL   L GLV RF L
Sbjct: 608 TSAASEETASSSVELARLGTHLQGLVGRFRL 638