Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 550 a.a., aromatic acid chemoreceptor from Pseudomonas putida KT2440

 Score =  300 bits (768), Expect = 9e-86
 Identities = 179/374 (47%), Positives = 249/374 (66%), Gaps = 5/374 (1%)

Query: 168 TFNQSGVQTAVDSAAQTYSSAQWIVGSIIVLALTATL-LLAW-LLTRSITAPLGQALIVA 225
           T ++ G Q  ++S  +  + AQ +  S+ +L +T  L +L W  + + +  PL +A    
Sbjct: 178 TLSERGQQIMLESDRRL-ARAQLL--SLCLLGVTVVLAVLCWAFIAQRVLHPLREAGGHF 234

Query: 226 RTIASGDLSQPIAVSGKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVME 285
           R IASGDLS P+   G +E  QL   L  MQ   + TL  I+  A+QL  AA  +++V E
Sbjct: 235 RRIASGDLSVPVQGQGNNEIGQLFHELQRMQQSQRDTLGQINNCARQLDAAATALNAVTE 294

Query: 286 QSTRDLQAQNDEIEQAATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETIS 345
           +S  +L+ Q  E+EQAATAVTEM+ AV+EVA NA+++++ +  S++ +     Q+SE I 
Sbjct: 295 ESANNLRQQGQELEQAATAVTEMTTAVEEVARNAITTSQTTSESNQLAAQSRRQVSENID 354

Query: 346 SIQNLVDEVLGASNKAEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRG 405
             + +  E+  +S   + L  Q +DI KVLEVIR ++ QTNLLALNAAIEAARAGEAGRG
Sbjct: 355 GTEAMTREIQTSSAHLQQLVGQVRDIGKVLEVIRSVSEQTNLLALNAAIEAARAGEAGRG 414

Query: 406 FAVVADEVRSLAQRTQDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSA 465
           FAVVADEVR+LA RTQ ST+EIEQMI  +Q GT+  V ++ +S  +A  TL    ++G  
Sbjct: 415 FAVVADEVRTLAYRTQQSTQEIEQMIGSVQAGTEAAVASMQASTNRAQSTLDVTLASGQV 474

Query: 466 LEKITAAISQISQRNLVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQEL 525
           LE I +AI +I++RNLVIASAAE+QA VAR+VDR+L+NIR+LS  +AAGA QTS AS+ L
Sbjct: 475 LEGIYSAIGEINERNLVIASAAEEQAQVAREVDRNLLNIRELSNHSAAGAQQTSEASKAL 534

Query: 526 SRLAVDLNGLVARF 539
           S L  ++  LV RF
Sbjct: 535 SGLVGEMTALVGRF 548