Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  434 bits (1117), Expect = e-126
 Identities = 253/539 (46%), Positives = 350/539 (64%)

Query: 1   MSLRNMRIGLRASLSFGVLASLLVIVGMFGLGQMAKLRQSALVIEASWMPSIENIHDSAA 60
           MSLRNM I  RA L F ++  L++ +G+F L QM  +RQ+ + IE   +PSI+ + +  A
Sbjct: 1   MSLRNMNIAPRALLGFALIGLLMLGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTA 60

Query: 61  IVASIRLEALRLATTDESRIRDNSKALITRQHTELQTLLDHHKTLLSGDEEREMLTQLEG 120
           +   +R  + RL    E   + ++  ++ ++++++      +  ++   +E+    Q   
Sbjct: 61  LNLRMRTLSYRLLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQAAFDQYGQ 120

Query: 121 NANAYLSLVGQIVALVDKDQQQDAIDLLNSRLAPQGVILNKSLTDMITFNQSGVQTAVDS 180
             N Y  L  ++  L   D+  +  DLLN  L      +NK +  ++  N    +   + 
Sbjct: 121 LLNQYRQLESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTLVRINTDQTRATNEK 180

Query: 181 AAQTYSSAQWIVGSIIVLALTATLLLAWLLTRSITAPLGQALIVARTIASGDLSQPIAVS 240
           AA  Y+ A  +V  ++V A   T   A+LLTRSI  P+ +AL  A  +A GDL+  I   
Sbjct: 181 AANQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAE 240

Query: 241 GKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDEIEQ 300
           G DE A+LL A+A MQ +L+ TL+ I+ SA QL  AAEE+++V ++S R LQ QN+EIEQ
Sbjct: 241 GTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQ 300

Query: 301 AATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQNLVDEVLGASNK 360
           AATAVTEM++AV+EVA NAVS++EAS  +   +  G   + ET+ +I+ +  +V   +  
Sbjct: 301 AATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKL 360

Query: 361 AEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT 420
              LA Q++DI KVL+VIRG+A QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RT
Sbjct: 361 ITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 421 QDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQISQRN 480
           Q ST EIE+MI  IQ GT+  VE++ +S E+A  TL  A  AG AL+ I  A++QI++RN
Sbjct: 421 QQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERN 480

Query: 481 LVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVARF 539
           LVIASAAE+QA VAR+VDR+LVNI DLS Q+A GA QTSAAS ELSRLAVDLNGLVARF
Sbjct: 481 LVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARF 539