Pairwise Alignments

Query, 1303 a.a., ATP-dependent helicase HrpA from Pseudomonas simiae WCS417

Subject, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

 Score =  249 bits (635), Expect = 1e-69
 Identities = 177/473 (37%), Positives = 252/473 (53%), Gaps = 32/473 (6%)

Query: 71  SLPIAAKRDEIKEALNKHQVLIIAGETGSGKTTQLPKICLEIGRGQFGLIGHTQPRRIAA 130
           SLPI A    +++AL     +++    G+GKTT++P   L         I   +PRR+AA
Sbjct: 3   SLPIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRLAA 62

Query: 131 RSVASRVAEELATPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQNDRYLERYDTII 190
           R+ A R+A EL   +G  VGY++R + +    T I+++T+GIL    Q D  LE    +I
Sbjct: 63  RAAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGLLI 122

Query: 191 VDEAHERSLNIDFLLGYL---KTLLPRRPDLKVIITSATIDLERFSKHFDDAPIVEVSGR 247
            DE HERSL+ D  L      + LL   P LK+++ SAT++ ER S+  DDAP+V   GR
Sbjct: 123 FDEFHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDAPVVSSEGR 182

Query: 248 TFPVDT-WYRPLTLEQDEEGNRVEDDLTVDQAILATLDEIAAYERSERRSPGDVLVFLPG 306
             PVD  W RP      + G  +E  + VD  + A  D+            G VLVFLPG
Sbjct: 183 MHPVDIRWGRPF-----QPGEFIEPRV-VDCVLHALADQA-----------GSVLVFLPG 225

Query: 307 EREIRDAAEVLRKAQLKHTEIL--PLYARLSPAEQQRIFQSHPG---RRVVLATNVAETS 361
           + EIR   + L++      EIL  PL+  L     QR     P    R+VVLATN+AETS
Sbjct: 226 QAEIRRVHQSLQEVLGARPEILLCPLHGELD-LNAQRAAIDPPAKGLRKVVLATNIAETS 284

Query: 362 LTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAISQASANQRKGRCGRVEPGICVRLYSE 421
           LT+ G+R VID+G AR+ R+   + + RL  + IS+ASA QR GR GR+EPG+C RL+SE
Sbjct: 285 LTIDGVRVVIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSE 344

Query: 422 EDFIGRPEFTDPEILRTNLAAVILQMLHLRLGEITD-FPFIEPPDGKAISDGFNLLQELS 480
                       EIL+ +LA + LQ+   R G   +   +++ P   A +   +LL  LS
Sbjct: 345 AQHDQLAAHGSAEILQADLAGLALQL--ARWGVTPEQLRWLDQPPAAAYAQAQDLLARLS 402

Query: 481 AVDRNSQ--LTPLGRQLARLPVDPRMGRMLLEAAKLGSLQEVLIVASAMSIQD 531
           A    S+  L+  G+ +A LP  PR+  +LL    LG  Q    VA+ +  +D
Sbjct: 403 AFRPGSRDTLSEHGQAMAELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERD 455