Pairwise Alignments

Query, 610 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 610 a.a., Efflux ABC transporter, permease/ATP-binding protein mlr7818 from Variovorax sp. SCN45

 Score =  253 bits (646), Expect = 2e-71
 Identities = 198/593 (33%), Positives = 292/593 (49%), Gaps = 47/593 (7%)

Query: 31  YYLRQVWPHFAALLVVGLIGALI-EVALFSYLSRIIDLAQGTPPADFFQVHSTELIWMAV 89
           Y  +  W   AAL    ++GA +  V +   L  ++D    TP  D  Q      I + +
Sbjct: 36  YLWQYKWRVIAALTF--MVGAKVANVGVPVLLKNLVDTM--TPKPDMAQALLIVPIGLLL 91

Query: 90  VALLLR---PIFGALHDLLVHQTISPGMTSLIRWQNHSYVLKQSLNFFQNDFAGRIAQRI 146
              LLR    +FG L +L+  +  + G    I  +   ++   SL F             
Sbjct: 92  AYGLLRFSTALFGELRELIFAKA-TEGTARQIALEVFGHLHSLSLRFHLE---------- 140

Query: 147 MQTGNSLRD--SAVAAVDAIWHVAIYAISSLVLFAEADWRLMI------PLVTWIICYGL 198
            QTG   RD       V ++  +++Y+I   ++  E    L I       L  WI    L
Sbjct: 141 RQTGGMTRDIERGTRGVHSLISMSLYSIVPTII--ELVLVLCILGVKFDSLFVWITLAAL 198

Query: 199 ALRY-FVPRVKERSV----ISSEARSKLMGRIVDGYTNITTLKLFAHTRYEQEYAKEAII 253
            L   F   V E         +E  S    R VD   N  T+K F +  +E +   +A +
Sbjct: 199 VLYITFTVTVTEWRTQFRKTMNELDSMAQSRAVDSLLNYETVKYFNNEEFEAK-RYDASL 257

Query: 254 EQTEKTQLASRVVTSMDIVITTMNGLLIVTTTGLALWLWTQSLI----SVGAIALATGLV 309
           ++  K  + S+   SM   + T    LI  +  L LW  T  ++    ++G + +    +
Sbjct: 258 DRYRKAAIKSQRTLSM---LNTGQQALIAISLVLMLWRATSGVVDGRMTLGDLVMVNAFM 314

Query: 310 IRIVNMSGWIMWVVNGIFENIGQVQDGLKTIAQPLAVIDRDNAPRLSVPHGEVRFEQVDF 369
           I++     ++  +   I +++  +      + +   V D   A  L+     VRFE V F
Sbjct: 315 IQLYIPLNFLGVIYREIKQSLTDLDKMFVLMEKEREVRDAPEAQPLAGTDSTVRFEDVSF 374

Query: 370 HYGKKSGIIGGLNLEIKAGEKIGLIGPSGAGKSTLVNLLLRLYDLQGGRILIDGQNIADV 429
            Y     I+  ++ EI AG+ + ++GPSG+GKSTL  LL R YD+Q G I I G++I DV
Sbjct: 375 AYEPARPILKHVSFEIPAGKTVAVVGPSGSGKSTLARLLYRFYDVQHGHITIGGEDIRDV 434

Query: 430 AQESLREQIGMITQDTSLLHRSIRDNLLYGKPDATDEELWAAVHKARADEFIPLLSDSEG 489
            Q S+R  IG++ QDT L + ++  N+ YG+P AT EE+ AA   AR  +FI     S  
Sbjct: 435 TQSSVRRAIGIVPQDTVLFNDTVEYNIAYGRPGATREEVEAAARAARIHDFI-----SAT 489

Query: 490 RTGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEAAIQESLETL 549
             G +  VGERG+KLSGG++QR+AIAR LLK+ PI+I DEATSALDS  E AIQ  L++ 
Sbjct: 490 PKGYETTVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANERAIQSELKSA 549

Query: 550 MQGKTVIAIAHRLSTIARMDRLVVLEKGQIAESGSHAELLAHGGLYARLWQHQ 602
            Q KT + IAHRLST+     ++VLE G I E G+HAELLA  G YA++W  Q
Sbjct: 550 AQDKTTLVIAHRLSTVVDAHEILVLESGVIVERGTHAELLAKQGRYAQMWALQ 602