Pairwise Alignments

Query, 610 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 583 a.a., lipid A export permease/ATP-binding protein MsbA from Enterobacter asburiae PDN3

 Score =  241 bits (614), Expect = 8e-68
 Identities = 177/592 (29%), Positives = 296/592 (50%), Gaps = 45/592 (7%)

Query: 34  RQVWPHFA----ALLVVG---LIGALIEVALFSYLSRIIDLAQGTPPADFFQVHSTELIW 86
           R++WP  A     L+V G   ++ A  +  + S L  ++D         F +   + L+W
Sbjct: 14  RRLWPMIAPFKTGLIVAGVALILNAASDTFMLSLLKPLLD-------DGFGKTDRSVLLW 66

Query: 87  MAVVAL---LLRPIFGALHDLLVHQTISPGMTSLIRWQNHSYVLKQSLNFFQNDFAGRIA 143
           M +V +   +LR I   +    +   +S  +   +R +  S+++   ++FF     G + 
Sbjct: 67  MPLVVIGLMILRGITSYISSYCI-SWVSGKVVMTMRRRLFSHMMGMPVSFFDKQSTGTLL 125

Query: 144 QRIMQTGNSLRDSAVAAVDAIWHVAIYAISSLVLFAEADWRLMIPLVTWIICYGLALRYF 203
            RI      +  S+ +A+  +       I    +     W+L I L+       +A+R  
Sbjct: 126 SRITYDSEQVASSSSSALITVVREGASIIGLFAMMFYYSWQLSIILIVLAPIVSIAIRVV 185

Query: 204 VPRVKERSVISSEARSKLMGRIVDGYTNITTLKLFAHTRY----EQEYAKEAIIEQTEKT 259
             R +      S+     MG++    T      L  H        Q+   +   + + K 
Sbjct: 186 SKRFRN----ISKNMQNTMGQV----TTSAEQMLKGHKEVLIFGGQDVETKRFDKVSNKM 237

Query: 260 QLASRVVTSMDIVITTMNGLLIVTTTGLALWLWTQSLISVGAIALATGLVIRIVNMSGWI 319
           +L    + S   +   +  + ++ +  LA  L+  S  SV    L  G +  + +    +
Sbjct: 238 RLQGMKMVSASSISDPI--IQLIASLALAFVLYAASFPSVME-TLTAGTITVVFSSMIAL 294

Query: 320 MWVVNGIFENIGQVQDGLKTIAQPLAVID----RDNAPR-LSVPHGEVRFEQVDFHY-GK 373
           M  +  +     Q Q G+       +++D    +D   R +   +G+V F  V F Y G+
Sbjct: 295 MRPLKSLTNVNAQFQRGMAACQTLFSILDSEQEKDEGKRVIERANGDVEFRNVTFTYPGR 354

Query: 374 KSGIIGGLNLEIKAGEKIGLIGPSGAGKSTLVNLLLRLYDLQGGRILIDGQNIADVAQES 433
           +   +  +NL I AG+ + L+G SG+GKST+ +L+ R YD+  G IL+DG ++ +   +S
Sbjct: 355 EVPALRNINLSIPAGKTVALVGRSGSGKSTIASLMTRFYDINEGEILLDGHDLREYTLQS 414

Query: 434 LREQIGMITQDTSLLHRSIRDNLLYGKPDA-TDEELWAAVHKARADEFIPLLSDSEGRTG 492
           LR Q+ +++Q+  L + ++ +N+ Y + D  + E++  A   A A +FI  + +     G
Sbjct: 415 LRNQVALVSQNVHLFNDTVANNIAYARTDEYSREQIENAARMAYAMDFINKMDN-----G 469

Query: 493 LDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEAAIQESLETLMQG 552
           LD  +GE GV LSGGQRQRIAIAR LL+D+PILI+DEATSALD+E E AIQ +L+ L + 
Sbjct: 470 LDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSALDELQKN 529

Query: 553 KTVIAIAHRLSTIARMDRLVVLEKGQIAESGSHAELLAHGGLYARLWQHQTG 604
           +T + IAHRLSTI + D +VV+E G I E GSHA+LL H G+YA+L + Q G
Sbjct: 530 RTSLVIAHRLSTIEQADEIVVVEDGVIVERGSHADLLEHRGVYAQLHKMQFG 581