Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Pseudomonas simiae WCS417

Subject, 808 a.a., DNA gyrase subunit B from Xanthobacter sp. DMC5

 Score =  815 bits (2105), Expect = 0.0
 Identities = 438/813 (53%), Positives = 563/813 (69%), Gaps = 38/813 (4%)

Query: 7   YDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIH 66
           Y + SI+VLKGLDAVRKRPGMYIGDTDDGSGLHHMV+EVVDN+IDEALAG   ++++ + 
Sbjct: 13  YGAQSIQVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGWAKEVTVTLE 72

Query: 67  PDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126
            + S+TV D+GRGIP D+H EEGVSAAEVIMT LHAGGKF+ NSYKVSGGLHGVGVSVVN
Sbjct: 73  ANGSVTVTDDGRGIPTDLHPEEGVSAAEVIMTQLHAGGKFNQNSYKVSGGLHGVGVSVVN 132

Query: 127 ALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVGDSET--TGTQIHFKPSAETFKNIHFS 184
           ALS  L LT+ R GK     + HG  + P+K+VG +     GT++ F PS ETF  I F 
Sbjct: 133 ALSTTLDLTIWRDGKEHYMRFRHGDAEAPLKVVGTAPAGKRGTKVTFLPSPETFTRIEFD 192

Query: 185 WDILAKRIRELSFLNSGVGIVLKDERSG--KEELFKYEGGLRAFVEYLNTNKTAVNQVFH 242
           +  L  R+REL+FLNSGV IVL D R    K E   YEGG+ AFV+YL+ NKTA+     
Sbjct: 193 YATLEHRLRELAFLNSGVLIVLTDARGPEPKREELHYEGGVEAFVKYLDRNKTALIAKPV 252

Query: 243 FNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEAEG 302
                +DGI VE AL WND ++EN+LCFTNNIPQRD GTH  GF +ALTR +  Y    G
Sbjct: 253 VIRAEKDGITVEAALSWNDGYHENVLCFTNNIPQRDRGTHFTGFAAALTRQVLGYANTSG 312

Query: 303 LAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFL 362
           ++KK KV  TG+D REGLTA++SVKVPDPKFSSQTKDKLVSSEV+  VE  +G+  +++ 
Sbjct: 313 ISKKEKVDPTGEDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPVVENLVGEALANWF 372

Query: 363 LENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELY 422
            ENP EAK V+GK+++AA AREAARKAR++TRRK  LD+A LPGKLADCQEKDPA SE++
Sbjct: 373 EENPVEAKNVIGKVVEAAAAREAARKARDLTRRKSPLDVASLPGKLADCQEKDPAKSEIF 432

Query: 423 LVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRD 482
           +VEGDSAGGSAKQGR+R  QA+LPL+GKILNVE+ARFDKM+SS+++GTLITALG GIGRD
Sbjct: 433 IVEGDSAGGSAKQGRDRAFQAVLPLRGKILNVERARFDKMLSSEQIGTLITALGTGIGRD 492

Query: 483 EYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGK 542
           +++I KLRYH IIIMTDADVDG+HIRTLLLTFFFRQ+PE+++ G+++IAQPPLYKV +GK
Sbjct: 493 DFDIAKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPEIVDAGHLFIAQPPLYKVARGK 552

Query: 543 QEQYIKDDDAMEEYMTQSALEDASLHLNDEAPG--ISGESLERLVNDFRMVMKTLKRLSR 600
            E Y+KD+ A+E+Y+  + LE+ASLHL   A G   +G  L  +V+  R +   L  L  
Sbjct: 553 SETYLKDEKALEDYLITTGLEEASLHL---ATGEVRTGADLAHVVDVSRQLRSALSALHP 609

Query: 601 LYPQELTEHFIYLPAVSLEQLGDHAAMQDWLAQYEVRLRTV------------EKSGLVY 648
            Y + + E      A +   L D A      A+   RL  +            +++G V+
Sbjct: 610 RYNRAVAEQAALAGAFAPAALEDAATGSAAAAEVARRLDALADETERGWTGICDETGYVF 669

Query: 649 KASLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDDGAYI 708
             ++R                 G++     +  F  S + + + TL   L  +    A +
Sbjct: 670 SRTVR-----------------GVAEVARLDHAFIASPEARRLDTLARDLDGVFAAAATL 712

Query: 709 QRGERKKQVKEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTI 768
           +R   ++ +    +  D +     K  ++QRYKGLGEMNP+QLWETT+D   R +L+V +
Sbjct: 713 KRRSDEQVLFGAVDLFDAVTDSGRKGLSLQRYKGLGEMNPEQLWETTLDINARSLLQVRV 772

Query: 769 EDAIGADQIFNTLMGDAVEPRRDFIESNALAVS 801
           ++   AD +F+ LMGD VEPRR+FI+ NAL  S
Sbjct: 773 KEVDAADDLFSRLMGDTVEPRREFIQENALRAS 805