Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Pseudomonas simiae WCS417

Subject, 803 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Dickeya dianthicola ME23

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 545/803 (67%), Positives = 653/803 (81%), Gaps = 6/803 (0%)

Query: 5   NTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISII 64
           N+YDS+SIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDN+IDEALAG+C DI + 
Sbjct: 3   NSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIVVT 62

Query: 65  IHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 124
           IH D S++V+D+GRGIP  +H+EEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV
Sbjct: 63  IHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 122

Query: 125 VNALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVGDSETTGTQIHFKPSAETFKN-IHF 183
           VNALSE+L L +RR GK+  Q Y HGVP+ P+   GD++ TGT + F PS ETF N + F
Sbjct: 123 VNALSEKLELVIRREGKVHRQEYRHGVPQAPLGATGDADATGTTVRFWPSLETFTNMVEF 182

Query: 184 SWDILAKRIRELSFLNSGVGIVLKDERS-GKEELFKYEGGLRAFVEYLNTNKTAVN-QVF 241
            +DILAKR+RELSFLNSGV I L+DER   K + F YEGG++AFVEYLN NKT ++ QVF
Sbjct: 183 EYDILAKRLRELSFLNSGVSIRLRDEREENKADHFHYEGGIKAFVEYLNRNKTPIHPQVF 242

Query: 242 HFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEAE 301
           +F+ ++ D IGVEIA+QWND F EN+ CFTNNIPQRDGGTHL GFR+A+TR LN Y++ E
Sbjct: 243 YFSAEK-DSIGVEIAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNNYMDKE 301

Query: 302 GLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDF 361
           G +KK KV+ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+A+E  M     D+
Sbjct: 302 GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSALESLMNDRLVDY 361

Query: 362 LLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 421
           L+ENPN+AK+VVGK+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQE+DPALSEL
Sbjct: 362 LMENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL 421

Query: 422 YLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGR 481
           YLVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKM+SSQEV TLITALGCGIGR
Sbjct: 422 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR 481

Query: 482 DEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKG 541
           DEYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQ+PE++ERG+++IAQPPLYKVKKG
Sbjct: 482 DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVFIAQPPLYKVKKG 541

Query: 542 KQEQYIKDDDAMEEYMTQSALEDASLHLNDEAPGISGESLERLVNDFRMVMKTLKRLSRL 601
           KQEQYIKDD+AM++Y    AL+ A+LH N  AP ++GE LE+LV ++    K + R+ R 
Sbjct: 542 KQEQYIKDDEAMDQYQIMLALDSATLHTNAHAPALAGEPLEKLVAEYYGAQKLIDRMERR 601

Query: 602 YPQELTEHFIYLPAVSLEQLGDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVW 661
           YP+ L    +Y PA++  +L D A  Q W+      L   E+ G  Y   LR+  ER+  
Sbjct: 602 YPRALLNALVYQPALTEARLNDQAQAQQWIDSLIHYLNEKEQHGSTYSFLLRQSNERHE- 660

Query: 662 LPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDDGAYIQRGERKKQVKEFK 721
            P + + +HG+ +    +  F   N+Y+ +  LG +L  L++D AY++RGERK+ V  F+
Sbjct: 661 -PVLRVRTHGVDSDYALDLAFVQGNEYRKINLLGEKLRGLIEDSAYVERGERKQPVASFE 719

Query: 722 EALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNTL 781
           +ALDWL+ ES +   IQRYKGLGEMNP+QLWETTMDP  RRMLRVT++DAI AD++F TL
Sbjct: 720 QALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADELFTTL 779

Query: 782 MGDAVEPRRDFIESNALAVSNLD 804
           MGDAVEPRR FIE NAL  +N+D
Sbjct: 780 MGDAVEPRRAFIEENALKAANID 802