Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Pseudomonas simiae WCS417

Subject, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  580 bits (1495), Expect = e-170
 Identities = 302/555 (54%), Positives = 392/555 (70%), Gaps = 11/555 (1%)

Query: 7   YDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIH 66
           Y + +I++L+GL+AVRKRP MYIGD     GLHH+++EVVDNSIDEALAGHCD I + + 
Sbjct: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALAGHCDTIHVTVL 70

Query: 67  PDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126
            D S+ V DNGRGIP D+H++E  SA EV+MTVLHAGGKFD ++YKVSGGLHGVGVS VN
Sbjct: 71  EDNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVN 130

Query: 127 ALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVGDSETTGTQIHFKPSAETFKNIHFSWD 186
           ALS  L  TV R+GK++EQ Y  GVP+  +  +G++E  GT IHF P  + F    + ++
Sbjct: 131 ALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETEKRGTIIHFVPDGDIFTVTEYKYE 190

Query: 187 ILAKRIRELSFLNSGVGIVLKDER------SGKEELFKYEGGLRAFVEYLNTNKTAVNQV 240
            +A R+RE++FLN+GV I  KD R      + K + F  EGGL  FVEYL+  +  + Q 
Sbjct: 191 TIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQE 250

Query: 241 FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA 300
             +    ++ + V++A+ +N SF+EN++ + N I   +GGTH+ GFR ALTR L  Y + 
Sbjct: 251 PIYIESEKNAVPVQVAMSYNSSFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYADK 310

Query: 301 EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD 360
            G+  K K   +GDD REGLTA+ISVKV +P+F  QTK KL +SEV +AV+  + +    
Sbjct: 311 SGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVLQY 370

Query: 361 FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 420
           +L E+P EAK++VGK++ AA+AR AARKAREM +RK  L   GLPGKLADC   +P + E
Sbjct: 371 WLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEVCE 430

Query: 421 LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGC--G 478
           LYLVEGDSAGGSAKQGR+R  QAILPLKGKILNVEKA   K+  + E+  ++TALG   G
Sbjct: 431 LYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVKFG 490

Query: 479 IGRDEYNID--KLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLY 536
              DE  +D   LRYH I+IMTDAD+DGSHIRTL+LT FFR +  LIE GY+YIA PPLY
Sbjct: 491 TAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPPLY 550

Query: 537 KVKKGKQEQYIKDDD 551
            +KKGK E+Y   +D
Sbjct: 551 LLKKGKDERYCWSED 565



 Score = 90.1 bits (222), Expect = 3e-22
 Identities = 42/61 (68%), Positives = 48/61 (78%)

Query: 737 IQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNTLMGDAVEPRRDFIESN 796
           IQRYKGLGEMNP+QLW TTMDP  R + +VTIE A  AD +F+ LMGD V PRR+FIE N
Sbjct: 585 IQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIEKN 644

Query: 797 A 797
           A
Sbjct: 645 A 645