Pairwise Alignments

Query, 721 a.a., chromosome segregation protein SMC from Pseudomonas simiae WCS417

Subject, 667 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 67.4 bits (163), Expect = 2e-15
 Identities = 118/530 (22%), Positives = 201/530 (37%), Gaps = 94/530 (17%)

Query: 1   MYLSALKVQNFRQFGADTNGLVIEFTKGVTALVGENDAGKSSVIDALRFVLQTRDGEYVR 60
           M L +L++  F+ FG D   +  +   GVT L+G N AGK++ + AL  +     G   R
Sbjct: 25  MKLCSLRISGFQSFGQDITDITFD---GVTYLLGPNGAGKTATLQALARMFGFEPG-LRR 80

Query: 61  LQPEDFHIPM---EGPQASQITIIAKFS---DLSVADQGALSEY---VTFNGGAAVVYIH 111
           L+  DFH+P+   E P    + I A F+    L  A+   +  +   +T      V  I 
Sbjct: 81  LRRSDFHVPLNEQEVPAQRSLWIEADFTFDETLDDAEDDTVPPFFTQMTLQTADGVPRIR 140

Query: 112 WTARRL--TDDALARRWVDIAVRSGHSGGGPS----IDTNVRQLLAAAYLRPLRDATREM 165
           +    +   D  +  R   +     H  G P+    +    R  +   YL   RD    +
Sbjct: 141 YRLEGILHPDGEVEERLHYVTRMDEH--GQPTTLKPVAKRERDEIHVHYLPARRDPADHI 198

Query: 166 SPGRGSRLSQVLK------NFPSIKDGTGFDIDNPLENPASLSL-AGLAGYLRHLVN--- 215
           + G  + L ++L+      +  SIK  T    +   EN +  +L AGL+G  + L     
Sbjct: 199 AFGASALLGRLLRAVNWSDDRDSIKQLTEQITECLSENESIKTLSAGLSGAWQRLHKGDF 258

Query: 216 -LHPGVAAAQDSVNDNYLSHLSLEGDELHGRINFVEGISESARLRQILERMELSLLDQGS 274
             +P +  A   + +  L HLS+     HG  N         +   +   + L+ L  G 
Sbjct: 259 FANPSLTFANSEI-EAILRHLSISFTPGHGESNVDYARLSDGQKSMLYLSLVLTSLTIGR 317

Query: 275 REGRGEYGLGSNNLLFMACELLLLGKEPDGLPLLLIEEPEAHLHPQRQLRLMEFLTAAAT 334
               G+      N  F   +L     +P    +L +EEPE  L P    R++  L ++  
Sbjct: 318 EVRSGQ------NTSFDPLKL-----KPAAYTILAVEEPENSLSPHYLGRIVSSLKSSVG 366

Query: 335 PKPSLLTVTQPMAVDEREEDTLPWSEGTEVLSALSSGEDGSTANEVNQESETRPVQVILT 394
                L  TQ  ++  R E                   D      +N + ET    ++L 
Sbjct: 367 VDAQALIATQAPSMLRRVE------------------PDQIRYLRLNSKRETDVSTIVLP 408

Query: 395 THSPNLSSKIALDNLVLMHGRKAYSLGKKHTKLDKGDYRFLARFLDVTKANLFFARGLLI 454
                                       KH+      Y+F+   +      L+FAR +++
Sbjct: 409 ---------------------------DKHSDA----YKFVREAVQAF-PELYFARLVVL 436

Query: 455 VEGDAEAILLPALAKMLGRDLTRHGVSVTNVGGVGLGRYARILQRAHPEH 504
            EGD+E I+LP + +  G  +  + V++  +GG  +  + R+L      H
Sbjct: 437 GEGDSEEIVLPRILQAKGAPVDEYAVAIAPLGGRHVNHFWRLLNALGTPH 486