Pairwise Alignments

Query, 448 a.a., reverse transcriptase from Pseudomonas simiae WCS417

Subject, 373 a.a., putative Group II intron-encoding maturase from Pseudomonas putida KT2440

 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 25/176 (14%)

Query: 166 YIIRSDVESFYESVRHKELLDGI-HQAPE---LSVLIKRILTRLMKDYVVVSGDENGLPR 221
           +I+ +D+ SF++ + H+ +L  + H+  +   L ++ K +   +M+D   V   + G P+
Sbjct: 80  WILDADITSFFDEIDHEWMLMFLGHRIADRRLLGLICKWLQAGVMEDGRRVVATK-GTPQ 138

Query: 222 GIGISAYLSEIYLSSIDAEIRRQDNLFY------YARYVDDMVLMYAPQRKELAAKYLET 275
           G  IS  L+ IYL  +     RQ    +        RY DD V+ +  + K  A ++L  
Sbjct: 139 GAVISPLLANIYLHYVLDLWARQWRQRHARGDVIIVRYADDSVVGF--RTKVQAQQFLVQ 196

Query: 276 LSEILDGKGLKFN-DKTKPIDLLE-----------GFKGKFDYLGYTFDLSSSSSG 319
           L E L   GL  N  KT+ I+              G    FD+LG+T   S++ SG
Sbjct: 197 LQERLARFGLSLNASKTRLIEFGRFAARNRRKRGLGKPETFDFLGFTHCCSTNRSG 252