Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 307 a.a., Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) from Sphingobium sp. HT1-2

 Score =  166 bits (419), Expect = 8e-46
 Identities = 107/297 (36%), Positives = 162/297 (54%), Gaps = 3/297 (1%)

Query: 1   MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEA 60
           M+LR LRYF+AVA+E +F RAA  L I+QPPLS+ IQ LE  VGA L +R +R + L++ 
Sbjct: 1   MDLRLLRYFVAVADEGNFNRAADRLHIAQPPLSRAIQQLEAHVGAPLLDRASRPLRLTDV 60

Query: 61  GRLFLHEARLVLAQVDKAADVARRAQLGELGELKIGFTSSAPFNSSIPQAIFAFRQAFPA 120
           GRL   +A  +LA+++    + + A   +   L IGF +S  + + +P+ I  FR+    
Sbjct: 61  GRLLHAQALQLLARMEDVETMVKTAATSQRRRLVIGFVASTIY-ARLPELIREFRKVADN 119

Query: 121 VHLNLQEMSSTEVAESLVDESIQVGLMRPLPLPDSLSVVELMREPLVAVMNAGHPLVAGS 180
           V L + E ++ E   +L D  I VG  R      ++  + L  E +VA     HPL  G 
Sbjct: 120 VELVMVESTTLEQIAALKDGRIDVGFGRIRFEDPAVRRIILRNEKMVAAFPMDHPLARG- 178

Query: 181 ERGLHLAQLAEEPFVFFPRSYGSGLYAQLLSLCRDAGFSPHFAQEAGEAMTIIGLVAAGL 240
           E  + +  LAEEP + +PR+       Q++SL RD    P    EA E    IGLVAA  
Sbjct: 179 EGPISIRDLAEEPQIIYPRAPRPSYADQVISLFRDHAIEPRIVHEARELQIAIGLVAAQE 238

Query: 241 GVSVLPASYQRIRIDGVVYRTLLDPEAVTSVWLVQRKGAQTPMAAAFVELLTRKSAQ 297
           G++++P S  R R   V +R L++P A + + +  R G ++P  A    ++ R+ AQ
Sbjct: 239 GMAIVPESVHRARSHDVAFRDLIEP-ATSPIIMSHRPGDRSPELALMASVIARQYAQ 294