Pairwise Alignments

Query, 266 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 415 a.a., mechanosensitive channel protein, miniconductance from Escherichia coli BL21

 Score =  162 bits (410), Expect = 1e-44
 Identities = 88/252 (34%), Positives = 150/252 (59%), Gaps = 1/252 (0%)

Query: 3   IKQLWLNVQDLWGALDEHPLLHASLGLLVLLVVALLLGRVARYLILHAVKLLGRQPALHW 62
           ++ L   V+DL G   +H      +  ++ L  A+++  +  +++L   +      +  W
Sbjct: 1   MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLT-AVVVHIILHWVVLRTFEKRAIASSRLW 59

Query: 63  LNDLRHNKVFHRLAQMTPSLVIQFGLYLVPDLSKTAILFIGNVALAITILFLVLATSALL 122
           L  +  NK+FHRLA     +++             A   +   A    +++ +L+  +LL
Sbjct: 60  LQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLL 119

Query: 123 NALLDIYARTEHARTRSIKGYVQLAKMVLFVFGAIIIVATLIDRSPLLLLSGLGAMSAVI 182
           + +L++  +   A    +KG  Q  K++  +   I++++ LI +SP +L+SGLGAM+AV+
Sbjct: 120 DVILNLAQKFPTASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVL 179

Query: 183 LLVYKDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSI 242
           +LV+KD +L  VA +QL++NDML++GDW+EMP+ GADG V+DI L TVKV+N+D TI +I
Sbjct: 180 MLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTI 239

Query: 243 PTWRLMSESFKN 254
           PTW L+S+SFKN
Sbjct: 240 PTWSLVSDSFKN 251