Pairwise Alignments

Query, 424 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 425 a.a., transporter from Pseudomonas simiae WCS417

 Score =  139 bits (349), Expect = 2e-37
 Identities = 103/392 (26%), Positives = 181/392 (46%), Gaps = 13/392 (3%)

Query: 33  TPMFMRTVLALFSGGFATFALLYCVQPMMPALSHEFSINAAQSSLILSVSTAMLALGLLI 92
           +P+    VL L      + A +Y  QP++ A++  F+++ A   +I++++     +GLL+
Sbjct: 6   SPLSGAVVLLLAVACGLSVANVYYAQPLLDAMAETFAMDHATVGIIIALTQVGYGVGLLL 65

Query: 93  TGPISDTLGRKPVMVAALFCAAFATIASGLMPSWEGILFMRALVGLSLSG-LAAVAMTYL 151
             P+ D L R+ ++V+ L  +  A     LM  W    F   L G++L+G LA VA   +
Sbjct: 66  LVPLGDLLNRRRLIVSQLLLSTLAV----LMVGWSSSSFW-LLAGMALTGLLAVVAQVLV 120

Query: 152 SEEIH---PQHIGLAMGLYIGGNAIGGMSGRLIIGVLIDFVSWHTAMLIIGALALIAATV 208
           +   H   P+  G  +GL   G  +G +  R + G + D   W +  L+   L L+ A +
Sbjct: 121 ALAAHLASPEQRGHVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAIL 180

Query: 209 FWKILPESRNFRASSLKPRSLVDSFVMHFKDAGLPWLFLEAFLLMGAFVTMFNYIGYRLL 268
            W++LP +   RAS      +   F +  ++  L    + A L+  A   ++  +   L 
Sbjct: 181 LWRVLPSTEPPRASGTYGALIRSVFSLFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLS 240

Query: 269 ADPYDLSQAVVGLLSLVYLSGIYSSAKIGSLADRLGRRRVLWATIVLMLAGMLLTLF--S 326
           A P  LS   +GL  L   +G   +A  G LAD+   +      ++LML   +   F  S
Sbjct: 241 APPLSLSHTQIGLFGLAGATGALGAAHAGRLADQGLAQWTSGTALLLMLLSWVAIGFTQS 300

Query: 327 PLWLVVPGMLIFTFGFFGAHSVASSWIGRRAVKAKGQASSLYLFCYYVGSSIAGTAGGFF 386
            LW ++ G+++F  G    H  + S I      A+ +  + Y+  Y VGS++   +    
Sbjct: 301 SLWALLLGVIVFDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYMLFYSVGSALGSISATAM 360

Query: 387 WHFAGWNGIGAFIVALLMGALLVALKLAKLPP 418
           + + GW  IG  ++   +  L +   LA LPP
Sbjct: 361 YAWGGW--IGVCVLGAAINLLALVYWLATLPP 390