Pairwise Alignments

Query, 424 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 425 a.a., efflux transporter from Pseudomonas putida KT2440

 Score =  653 bits (1685), Expect = 0.0
 Identities = 328/418 (78%), Positives = 368/418 (88%), Gaps = 7/418 (1%)

Query: 1   MNSAVAPLAQEVPPTALDEVVAQLNDAYIEKGTPMFMRTVLALFSGGFATFALLYCVQPM 60
           + +AVAPL  E  P  L E+       +IEKGTP FM+TVLALFSGGFATFALLYCVQPM
Sbjct: 12  VKTAVAPLLLEPKPAILTEM-------WIEKGTPAFMKTVLALFSGGFATFALLYCVQPM 64

Query: 61  MPALSHEFSINAAQSSLILSVSTAMLALGLLITGPISDTLGRKPVMVAALFCAAFATIAS 120
           MP LS EF+INAAQSSL+LSVSTAMLA GLLITGPISD +GRKPVMV AL CAA +T+AS
Sbjct: 65  MPLLSREFAINAAQSSLVLSVSTAMLAFGLLITGPISDRIGRKPVMVFALVCAALSTLAS 124

Query: 121 GLMPSWEGILFMRALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIGGNAIGGMSGRL 180
            +MPSWE +L  RALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIGGNAIGGMSGRL
Sbjct: 125 AVMPSWELVLATRALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIGGNAIGGMSGRL 184

Query: 181 IIGVLIDFVSWHTAMLIIGALALIAATVFWKILPESRNFRASSLKPRSLVDSFVMHFKDA 240
           I GVLIDFVSWHTAML IG LAL+AA VFWK+LPESRNFRA ++ PRSL+D FVMHFKDA
Sbjct: 185 ITGVLIDFVSWHTAMLTIGGLALVAALVFWKVLPESRNFRAQTMNPRSLLDGFVMHFKDA 244

Query: 241 GLPWLFLEAFLLMGAFVTMFNYIGYRLLADPYDLSQAVVGLLSLVYLSGIYSSAKIGSLA 300
           GLPWLFLEAFLLMGAFVT+FNYIGYRLLA+PY ++QA+VGLLS+VYLSGIYSSA++G+LA
Sbjct: 245 GLPWLFLEAFLLMGAFVTLFNYIGYRLLAEPYHMNQALVGLLSVVYLSGIYSSAQVGALA 304

Query: 301 DRLGRRRVLWATIVLMLAGMLLTLFSPLWLVVPGMLIFTFGFFGAHSVASSWIGRRAVKA 360
           D+LGRR+V WA+IV+M  G+L+TL SPL +V+ GML+FTFGFFGAHSVASSWIGRRA+KA
Sbjct: 305 DKLGRRKVFWASIVVMAVGLLMTLASPLVMVIVGMLVFTFGFFGAHSVASSWIGRRALKA 364

Query: 361 KGQASSLYLFCYYVGSSIAGTAGGFFWHFAGWNGIGAFIVALLMGALLVALKLAKLPP 418
           KGQASSLYLFCYY GSS+AGTAGG FWH  GWNGIG FI +LL  AL+VAL L+KLPP
Sbjct: 365 KGQASSLYLFCYYAGSSVAGTAGGVFWHQWGWNGIGLFIGSLLAVALMVALHLSKLPP 422