Pairwise Alignments

Query, 424 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 390 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 78.2 bits (191), Expect = 4e-19
 Identities = 83/348 (23%), Positives = 140/348 (40%), Gaps = 25/348 (7%)

Query: 51  FALLYCVQPMMPALSHEFSINAAQSSLILSVSTAMLALGLLITGPISDTLGRKPVMVAAL 110
           F   Y + P++P LS  F +      L++        + +L  G +SD  GR  ++  +L
Sbjct: 21  FFQAYMIAPLIPKLSEVFGVTEQYIGLVIPAYMITYGISILFYGVLSDRFGRMRIIRFSL 80

Query: 111 FCAAFATIASGLMPSWEGILFMRALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYI-- 168
                 T  + L  +   ++ +R   GL  SG+  +A+  + +   P   G  +GL    
Sbjct: 81  LAFILLTALTALAQTSSQLIMLRLFTGLGASGVIPMALALVGDLYEPHERGKPLGLLFAA 140

Query: 169 --GGNAIGGMSGRLIIGVLIDFVSWHTAMLIIGALALIAATVFWKILPESRNFRASSLKP 226
             GG A+G  +G     VL  F+ W   ML +G +A++ A + W I   S      S KP
Sbjct: 141 MEGGMALGSTAG----VVLEPFIGWR--MLFLG-IAILGAIILWFI---SFQIDFKSQKP 190

Query: 227 R------SLVDSFVMHFKDAGLPWLFLEAFLLMGAFVT-MFNYIGYRLLADPYDLSQAVV 279
                    V S   H            +    G F + ++ ++GY   +  Y L +  +
Sbjct: 191 ELNKPNVRQVFSKFFHLLSMSRGAKTYSSVFWNGIFHSGIYTWLGY-YFSVKYILGEIGI 249

Query: 280 GLLSLVY-LSGIYSSAKIGSLADRLGRRRVLWATI-VLMLAGMLLTLFSPLWLVVPGMLI 337
           GL  L Y + G    + IG  ADR GR R++   + +  LA  LL     + L    + +
Sbjct: 250 GLAILGYGVPGFLFGSSIGRAADRWGRFRLIIPGLGIAALATALLATNISVILAAIAVTV 309

Query: 338 FTFGFFGAHSVASSWIGR-RAVKAKGQASSLYLFCYYVGSSIAGTAGG 384
            + G+     + +  +      K  GQA  L +F  + G  +     G
Sbjct: 310 ISLGYDLTQPLFAGIVTELGGKKYGGQAMGLNVFALFTGFGVGSLIFG 357