Pairwise Alignments

Query, 278 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 279 a.a., Uncharacterized protein conserved in bacteria from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  193 bits (490), Expect = 4e-54
 Identities = 106/274 (38%), Positives = 161/274 (58%), Gaps = 3/274 (1%)

Query: 4   VGRYNSLQVVKHTNFGLYLDGAQDGEILLPNRYIPKDIPSEDEDWLNVFIYLDSDDKLIA 63
           +G  ++L + + T  G YL+ +   E+LLP  Y+  D    +E  + VF+Y DS+D+L+A
Sbjct: 7   LGNISTLPITRFTANGAYLNLSNGTEVLLPKGYLLGDEKEGEE--VAVFVYTDSEDRLVA 64

Query: 64  TTEKPKVQVGEFASLKVVEVNSIGVFLDWGLPKDLLLPYSEEKRQLSAGEYCVVHVYLDK 123
            T++P   V EFA ++V EV   G F+DWGLPKDL +P SE  + +  GE  +V + +D 
Sbjct: 65  ITDRPVALVDEFAVMEVKEVTKFGAFMDWGLPKDLFVPMSEMGKPMKEGEQHLVMICVDF 124

Query: 124 HTKRITATARLDRYLDKTPANYQVGQEVDLLVAEATDMGFKAIINNKHWGLIHKNEVFKF 183
            T R+   ++   ++      ++ GQEVD LV E+TD+G+K +IN  + GL+++NE FK 
Sbjct: 125 KTNRLIGVSKYQDFMLTDTTIFEEGQEVDGLVFESTDLGYKVLINQHYEGLLYENETFKD 184

Query: 184 LRPGKEEKGFIKEIRADGNISLSLQPVGQEAASSLNSKILAKLRENNGSLPVSDKSDPAV 243
           +  G   K +IK+ R DG + L L P+G++       KIL  L+     LP+ DKS P  
Sbjct: 185 IAVGDNIKAYIKKRRDDGKLDLQLTPIGRQKYEEGAEKILNLLKVKR-FLPLHDKSSPEE 243

Query: 244 ISNLFGVSKGNFKKAIGALYKQGQIVIHADRIEL 277
           I    G+SK +FK++IG LYK  +I I  D I L
Sbjct: 244 IKKTLGMSKKHFKQSIGQLYKSRKIEIKTDGIAL 277



 Score = 27.3 bits (59), Expect = 4e-04
 Identities = 15/63 (23%), Positives = 27/63 (42%)

Query: 71  QVGEFASLKVVEVNSIGVFLDWGLPKDLLLPYSEEKRQLSAGEYCVVHVYLDKHTKRITA 130
           ++G  ++L +    + G +L+     ++LLP          GE   V VY D   + +  
Sbjct: 6   ELGNISTLPITRFTANGAYLNLSNGTEVLLPKGYLLGDEKEGEEVAVFVYTDSEDRLVAI 65

Query: 131 TAR 133
           T R
Sbjct: 66  TDR 68



 Score = 22.7 bits (47), Expect = 0.009
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 1   MALVGRYNSLQVVKHTNFGLYLDGAQDGEILLP 33
           +ALV  +  ++V + T FG ++D     ++ +P
Sbjct: 70  VALVDEFAVMEVKEVTKFGAFMDWGLPKDLFVP 102