Pairwise Alignments

Query, 460 a.a., sodium:solute symporter from Pseudomonas simiae WCS417

Subject, 494 a.a., proline:sodium symporter PutP from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 3e-30
 Identities = 126/475 (26%), Positives = 209/475 (44%), Gaps = 50/475 (10%)

Query: 5   LFVVLIYAAGMLVLGYYGMRRAKTHEDYLVAGRNLGPSLYMGTMAATVLGGASTVGTVRL 64
           L   +IY A M+++G+   R      DY++ GR+LG  +   +  A+ + G   +G    
Sbjct: 8   LITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGA 67

Query: 65  GYVHGISGFWLCAALGAGIIALNLFLAKPLL-----KLKIFTVTQVLEKRY---NPMARQ 116
            Y+ G+S  W+   L  G     LF+A  L           T+      R+   + + R 
Sbjct: 68  IYMSGLSESWIAIGLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRI 127

Query: 117 ASAVIMLAYALMIGVTSILAIGTVLQVLFGLPFWISVLLGGGVVVVYSTIGGMWSLTLTD 176
            SAV++L +  +   + I+A   + +  FG+ +  ++  G    + Y+ +GG  +++ TD
Sbjct: 128 ISAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAVSWTD 187

Query: 177 IVQFVIKTVGLMFILLP-ICLYRVGGWDELVAKLPASS-FSFTAIGWDTIITYFMIYFFG 234
            VQ  +    L  IL P I L   GG D     + A    +F  +   T I    +  +G
Sbjct: 188 TVQATLMIFAL--ILTPIIVLLATGGVDTTFLAIEAKDPTNFDMLKNTTFIGIISLMGWG 245

Query: 235 I-LIGQDIWQRVFTARD--EKVAK------------YAGTFA-GFYCILYGLACALIGMA 278
           +   GQ      F A D  + +AK              GT A GF+ I Y         +
Sbjct: 246 LGYFGQPHILARFMAADSVKSIAKARRISMTWMILCLGGTVAVGFFGIAY--------FS 297

Query: 279 AH--VLIPDLDNVNNAFAAIVKMSLPDGIRGLVIAAALAAMMSTASAGLLAASTVLTEDL 336
           AH  V  P  +N    F  + K+     I G++++A LAA+MST S  LL  S+ LTED 
Sbjct: 298 AHPEVAGPVNENHERVFIELAKLLFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDF 357

Query: 337 LP---RLRGGKQSSLGVNRLFTLLTGIAVLGIALVVND---VISALTLAYNLLVGGMLIP 390
                R    +   + V RL  LL  +A++ IA+  N    V+  ++ A+          
Sbjct: 358 YKTFLRKNASQVELVWVGRLMVLL--VALIAIAMAANPENRVLGLVSYAWAGFGAAFGPV 415

Query: 391 LIGAIFWKRATTSGAITSMTLGFVTALVFMIKD--GLDANTP--IYYSLAVGLVS 441
           ++ ++ WK  T +GA+  + +G +T +V+   +  GL    P  I+ SLA+  VS
Sbjct: 416 VLISVIWKGMTRNGALAGILVGAITVIVWKHFELLGLYEIIPGFIFASLAIYFVS 470