Pairwise Alignments

Query, 450 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 433 a.a., 23S rRNA (uracil-5-)-methyltransferase (NCBI) from Escherichia coli BW25113

 Score =  314 bits (805), Expect = 3e-90
 Identities = 180/423 (42%), Positives = 249/423 (58%), Gaps = 16/423 (3%)

Query: 29  LTIERLANDGRGIVFFEGRTWFVNGALAGEEVEARVLGTHGKIVEARTERVFSASELRRP 88
           +++  L + G+G+    G+T F+ G L  E  E  V     +   A+  R  S S  R  
Sbjct: 19  VSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERET 78

Query: 89  APCAHFGRCGGCSVQHLPHGEQLALKQRMLAEQLSRVAGVEPQEWAAPLSGAEFGYRRRA 148
             C HFG CGGC  QH      + L+QR  +  L+R+   +  E  A +    +GYRRRA
Sbjct: 79  PRCPHFGVCGGCQQQHA----SVDLQQRSKSAALARLMKHDVSEVIADVP---WGYRRRA 131

Query: 149 RVAVRWDARAKQLEVGFRAVASQDIVAIDECPVLVQALQPIMQRLPNMLRRLSKPQALGH 208
           R+++ +  + +QL++GFR   S DIV + +CP+L   L+ ++ ++   L  L   + LGH
Sbjct: 132 RLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGH 191

Query: 209 VELFSGTS-VAVLLRHIAPLSEADLQVLKEFCAFHEAQLWLHGEGQPEPVEADSVLGFRL 267
           VEL   TS   ++LRH APLS AD + L+ F       L+L     P+    ++V G  +
Sbjct: 192 VELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYL----APDSEILETVSG-EM 246

Query: 268 SHWD---LELAYRPGDFVQVNAGVNEAMVAQALEWLAPQPDERVLDLFCGLGNFALPLAR 324
             +D   L L + P DF+QVNAGVN+ MVA+ALEWL  QP++RVLDLFCG+GNF LPLA 
Sbjct: 247 PWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLAT 306

Query: 325 QVREVVAVEGVQTMVERAAVNAVSNDLHNVQFFQADLSQPLTDAEWAKQGFSAVLLDPPR 384
           Q   VV VEGV  +VE+   NA  N L NV F+  +L + +T   WAK GF  VLLDP R
Sbjct: 307 QAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR 366

Query: 385 DGALEVVRKLATLGAKRLVYVSCNPATLARDTVELVKQGYRLKRAGILDMFPQTAHVEAM 444
            GA  V++++  L   R+VYVSCNPATLARD+  L+K GY + R  +LDMFP T H+E+M
Sbjct: 367 AGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESM 426

Query: 445 ALF 447
            LF
Sbjct: 427 VLF 429