Pairwise Alignments

Query, 450 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 367 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Dickeya dianthicola ME23

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 95/365 (26%), Positives = 147/365 (40%), Gaps = 40/365 (10%)

Query: 110 QLALKQRMLAEQLSRVAGVEPQEWAAPLSGAEFGYRRRARVAVRWDARAKQLEVGFRAVA 169
           QL  K   L   ++      P  + +P+S     YR RA   + W        + F    
Sbjct: 14  QLEEKTGRLGAMMAPFDAPAPAVFRSPVSH----YRMRAEFRI-WHDGDDLYHIIFDQQT 68

Query: 170 SQDIVAIDECPVLVQALQPIMQRLPNMLRR----LSKPQALGHVELFSGTSVAVLLRHIA 225
            Q I  +D+ P   + +  +M  L + LR       K   + ++   SG     LL H A
Sbjct: 69  KQRI-RVDQFPAASELINRLMPALLSALRAEPVLRRKLFQIDYLSTLSGEIAVSLLYHKA 127

Query: 226 PLSE--ADLQVLKEFCAFHEAQLWLHGEGQPEPVEADS--------VLGFRLSHWDLELA 275
              E     ++L++        L L G      +  D         V G ++ +  +E  
Sbjct: 128 LDDEWQQHARLLRDQLREQGFALQLMGRATKTKICLDRDYVDECLPVAGRQMIYRQVE-- 185

Query: 276 YRPGDFVQVNAGVNEAMVAQALEWLAPQPDERVLDLFCGLGNFALPLARQVREVVAVEGV 335
                F Q NA +N  M+  AL        + +L+L+CG GNF+L LAR    V+A E  
Sbjct: 186 ---NSFTQPNAMMNIQMLEWALSVTQGSTGD-LLELYCGNGNFSLALARNFERVLATEIA 241

Query: 336 QTMVERAAVNAVSNDLHNVQFFQADLSQ------------PLTDAEWAKQGFSAVLLDPP 383
           +  V  A  N  +N + NVQ  +    +             L   + A      + +DPP
Sbjct: 242 KPSVAAAQYNIAANQIDNVQIIRMAAEEFTQAMNGVRQFNRLQGIDLAGYRCETIFVDPP 301

Query: 384 RDGALEVVRKLATLGAKRLVYVSCNPATLARDTVELVKQGYRLKRAGILDMFPQTAHVEA 443
           R G  +   KL      R++Y+SCNP TL R  +E + Q +R+ +  + D FP T H+E 
Sbjct: 302 RSGLDDGTVKLVQ-AYPRILYISCNPETL-RANLETLSQTHRISQLALFDQFPYTHHMEC 359

Query: 444 MALFE 448
             L E
Sbjct: 360 GVLLE 364