Pairwise Alignments

Query, 747 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

 Score =  410 bits (1055), Expect = e-119
 Identities = 230/686 (33%), Positives = 377/686 (54%), Gaps = 44/686 (6%)

Query: 69  LEIAEILADLKLDQDSLIAAVLYRGVREGHIQLATVGQRFGSVVAKLIDGVLRMAAISAS 128
           L +A ILAD+ +D  SL+AA+L+  + +  I    +  +FG  VA+L+DGV ++  ++  
Sbjct: 50  LAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFE 109

Query: 129 LSPRQSMVLGTQGQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKTADDEKRNRVARE 188
                      + Q EN +KM +AM  D+RV L+KLA+R   +R ++    EKR R+A+E
Sbjct: 110 TK--------AEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKE 161

Query: 189 VFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIATLLHERRLDRERFITDVMNQLR 248
             +IYAP+A+RLG+  I+ E EDL F+ + P +  +I   +   R +R+  +  +   L 
Sbjct: 162 TLEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLS 221

Query: 249 SELQATGVEADISGRAKHIYSIWRKMQRKGLAFSQIYDVRAVRVLVPEMRDCYTALGIVH 308
             L    +E ++SGR KHIY I++KM+ K  AF++I DV A R++V ++  CY  LG VH
Sbjct: 222 HCLAIDEIEGEVSGRQKHIYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVH 281

Query: 309 TLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRY 368
            L++ +P  F DYIA PK NGY+SLHT + G  G  +E+QIRT  M E A  G+ AHW Y
Sbjct: 282 NLYKPLPGRFKDYIAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLY 341

Query: 369 KGTDVKAGSNQYEEKISWLRQVLEWHEELGDIGGLAEQLRVDIEPDRVYIFTPDGHAIDL 428
           K +  +     +     W++ VLE  +  G+     E +++D+ PD VY+FTP G  ++L
Sbjct: 342 KSSGDEQPKGTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMEL 401

Query: 429 PKGATPLDFAYRVHTEIGHNCRGAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNP 488
           PKG+T +DFAY VHT++G++C   +IN R+ PL+  LQ+G  VEI+++    P+  WLN 
Sbjct: 402 PKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN- 460

Query: 489 NLGYITTSRARAKIVHWFKLQARDQNVAAGKTLLERELGRLG-----LPQVDFDKLAEKA 543
              ++ T +AR  I H  KLQ R ++++ G+ LL + L         +P      +  + 
Sbjct: 461 ---FVVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDSALDKIPTERVQAMLHEY 517

Query: 544 NMKIAEDMFAALGAGDLRLAQLVNLAQQLVEPERGSEQLELIPRKATGYKPGKRGDIQIQ 603
             +  ED+   +G G+ R+A +V  A++L+      EQL           P   G + I+
Sbjct: 518 RQETIEDLLEDIGLGN-RMAYVV--ARRLLGE---GEQL-----------PSPEGPLAIR 560

Query: 604 GVGNLMTQIAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLGGREPERIIQVSWGPV 663
           G   L+   A CC P+PGD IVG+++ G+G+ +H  +C ++ ++    PE+ IQ+SW   
Sbjct: 561 GTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRNITEI-RHNPEKCIQLSWAKD 619

Query: 664 PVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAVN----TRSNKEDNTALMSLTIEI 719
               + V++ +    + GL+      LL   +N    N    +   ++   +++ L + +
Sbjct: 620 VTGEFNVELRVELEHQRGLI-----ALLASSVNAADGNIEKISMDERDGRISVVQLVVSV 674

Query: 720 PGLDALGRLLGRISQLPNIIETRRNR 745
                L R++ ++  L  +I   R R
Sbjct: 675 HDRVHLARVIKKLRALTGVIRITRMR 700