Pairwise Alignments

Query, 747 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 701 a.a., 'Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II' transl_table=11 from Sphingobium sp. HT1-2

 Score =  384 bits (987), Expect = e-111
 Identities = 242/724 (33%), Positives = 380/724 (52%), Gaps = 47/724 (6%)

Query: 29  DPALDREALKAACEFARESEQQDNASKNLWAEGTSSFRTGLEIAEILADLKLDQDSLIAA 88
           DP  D   +  A  F   S Q+  + K   A G   F   +E+A IL D  LD  +++ A
Sbjct: 15  DPDADEAMINRAYVF---SVQKHGSQKR--ASGDPYFSHPIEVAGILTDFYLDDQTIVTA 69

Query: 89  VLYRGVREGHIQLATVGQRFGSVVAKLIDGVLRMAAISASLSPRQSMVLGTQGQVENLRK 148
           +L+  + +  +    + + FG  VA+++DGV +++ I A     ++         ENLRK
Sbjct: 70  LLHDTIEDTLVTYDEIEEAFGKDVARMVDGVTKLSKIEAMSENERA--------AENLRK 121

Query: 149 MLVAMVDDVRVALIKLAERTCAIRAVK-TADDEKRNRVAREVFDIYAPLAHRLGIGHIKW 207
            L+AM DD+RV L+KLA+R   +R +    +++KR R+A+E  DIYAPLA R+G+     
Sbjct: 122 FLLAMSDDIRVLLVKLADRLHNMRTLHFIKNEQKRRRIAKETMDIYAPLAERIGMYDFMR 181

Query: 208 ELEDLSFRYLEPDQYKQIATLLHERRLDRERFITDVMNQLRSELQATGVEADISGRAKHI 267
           E++ LSFR LEP+ Y  I   L + +      +  +  +L+  L    +   +SGR KH 
Sbjct: 182 EMQLLSFRVLEPEAYDSITKRLEQLKEGGHDKVDRIGAELQLLLGGHNLSVTVSGREKHP 241

Query: 268 YSIWRKMQRKGLAFSQIYDVRAVRVLVPEMRDCYTALGIVHTLWRHIPKEFDDYIANPKE 327
           YSIW+KMQ + ++F Q+ DV A RV+     DCY ALG++H  ++ +P  F DYI+ PK 
Sbjct: 242 YSIWKKMQERHISFEQLTDVMAFRVITETTEDCYRALGVIHQTFKMVPGRFKDYISTPKR 301

Query: 328 NGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRYKGTDVKAGSNQYEEKISWL 387
           NGYRSLHT VI  E   +EVQIR+  MH +AELG+ AHW Y     K   +  ++  +WL
Sbjct: 302 NGYRSLHTTVIHQENARIEVQIRSRDMHNDAELGLAAHWAY-----KQKGDATDQNAAWL 356

Query: 388 RQVLEWHEELGDIGGLAEQLRVDIEPDRVYIFTPDGHAIDLPKGATPLDFAYRVHTEIGH 447
           R ++E  E+  D   L E  R+ +  DR++ F+P G    LPKG+TP+DFAY VHT +G+
Sbjct: 357 RDLVEILEQSQDADELLEHTRMAMYQDRIFAFSPKGELHQLPKGSTPVDFAYAVHTSLGN 416

Query: 448 NCRGAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNPNLGYITTSRARAKIVHWFK 507
              GAK+NGR+VPL  SL+ G+QVEI+ S    P   WL+    +  T +ARA I  + +
Sbjct: 417 QTVGAKVNGRVVPLRTSLENGDQVEILKSAGQEPQPGWLS----FAITGKARAAIRRFIR 472

Query: 508 LQARDQNVAAGKTLLERELGRLGLPQVDFDKLAEKANMKIAEDMFAALGAGDLRLAQLVN 567
            + R + VA G+ L E  +GR         +LA +   K        L   D     +  
Sbjct: 473 QKQRGEEVALGEKLYEEIIGRFS------PELASELGDKALNAALKRLKLEDRASLMVAI 526

Query: 568 LAQQLVEPERGSEQLE-LIPRKATGYK-----PGKRGDIQIQGV-GNLMTQIAGCCQPLP 620
              +L++    SE +E LIP   +G +     P +   + I+G+   +  +++ CC P+P
Sbjct: 527 ATHRLLD----SEVMEALIPGSTSGQELEEAHPRQHAPVSIRGLTPGIAYKLSECCHPVP 582

Query: 621 GDAIVGYITQGRGVSIHRQDCASVLQLGGREPERIIQVSW-GPVPVLTYPVDIIIRAYDR 679
           GD IVG    G  + +H  DC +   L   + +  + +SW       T  + +I++  ++
Sbjct: 583 GDRIVGIRRTGEPIEVHTIDCRT---LEAGQDDDWVDLSWDSKSKGGTARLQVIVK--NQ 637

Query: 680 SGLLRDVSQVLLNERINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGRISQLPNII 739
            G L  V+ V    + N+L +    N+E       + +E+     L R++  +  L  ++
Sbjct: 638 PGALAAVANVFGATKANILNLQL-VNREGPFHTDIIDLEVADAQHLSRIVSALRALDTVV 696

Query: 740 ETRR 743
           +  R
Sbjct: 697 QADR 700