Pairwise Alignments

Query, 357 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 355 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 73/333 (21%), Positives = 152/333 (45%), Gaps = 22/333 (6%)

Query: 12  GIVLLCVFVFLLHSILTPFLVALLLAYLFDPVVDRLEKA-GLSRTWGVVAVFALFTLIIT 70
           G+V +  F+++L         A++L  +F P+  RL++  G +R    +A  +   +I  
Sbjct: 16  GLVTIA-FIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLATLSACLIIAI 74

Query: 71  ALVLVLVPMLAKQLFRLYELAPQ-------MLDWLQHTAMPWAQAKLGLADGFWKFDKVK 123
             V++   +L ++   LY+            ++  ++   P+ Q  L    G    + ++
Sbjct: 75  LPVIITSALLVQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQHLLDRF-GMGNLEGLR 133

Query: 124 AAISEHMGQTTDIVGVVLSQATASSLALIGWLTNLVLIPVVAFYLLRDWDLMMAKIRSLL 183
             I +   Q +       +QA +       +L +  ++  + ++LLRD   ++ K+R+ +
Sbjct: 134 EKIVKSAMQGSQFFA---TQAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPELVRKVRTAV 190

Query: 184 P-RDREERIVSLAEECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLIGLIAGLA 242
           P  + ++R + L  + + V+ A V+G +LV +  G +       + +   LL  ++    
Sbjct: 191 PLAEPQKRRLQL--KFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAFL 248

Query: 243 AIVPYMGFVIGIGAALVAGLFQFGGDLYP--MLGIVAVFMVGQALEGMVLTPLLVGDRIG 300
           +++P +G   GI    VA  F   G ++   +L +  VF++G  L   VL P+LVG    
Sbjct: 249 SLLPAVG--AGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIG--LVDNVLRPILVGKDTK 304

Query: 301 LHPVAVIFAILAGGELFGFTGILLALPVAAVIM 333
           +    ++ + L G  +FG  G ++   VAA+ M
Sbjct: 305 MPDYLILISTLGGLSVFGLNGFVIGPLVAALFM 337