Pairwise Alignments

Query, 234 a.a., DNA replication initiation factor from Pseudomonas simiae WCS417

Subject, 252 a.a., DnaA inactivator Hda (shorter homolog of DnaA) from Variovorax sp. SCN45

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 11/231 (4%)

Query: 5   QLPLGVRLRDDATFINYYPGANAAALGYVERL---CEADAGWTESLIYLWGKHGVGRTHL 61
           QL L + +    +F  ++ G N AAL +++       A A  +    YLWG+ G G+THL
Sbjct: 27  QLALDIGIATGPSFDAFFAGPNEAALRHLQVWVGGAGAPALHSPVPTYLWGEGGSGKTHL 86

Query: 62  LQAACLRFEQMGEPAVYLPLAELMDRGIGIFDHLEQYELVCLDDLQAIAGKAEWEEALFH 121
           L++  +   + G    +L    L       FD  E++  V LDD+      A  + A F+
Sbjct: 87  LESVRVALREQGASVGWLHAGLLEPPE---FD--ERWGAVLLDDVHLYT--AVQQHAAFN 139

Query: 122 LFNRLRDSGRRLLIAASTSPRELPIKLADLKSRMTLALIFQMRPLSDEDKLRALQLRASR 181
            F   +   R ++ A +  P +LP++  DL++R+    +F ++ LS+ ++   L+  A  
Sbjct: 140 WFVNAQTLQRGVVAAGALPPADLPLR-EDLRTRLGWGHVFHLQVLSESERRAVLRQAADA 198

Query: 182 RGLHLTDEVGHFILTRGTRSMSALFDLLEQLDQASLQAQRKLTIPFLKETL 232
           RG+ L+D+V  ++L R +R + +L +LL QLD  +LQ QR +TIP ++  L
Sbjct: 199 RGVMLSDDVLDYMLHRFSRDLGSLMELLSQLDGYALQTQRAITIPLIRSML 249