Pairwise Alignments

Query, 402 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 402 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  107 bits (267), Expect = 6e-28
 Identities = 91/392 (23%), Positives = 170/392 (43%), Gaps = 11/392 (2%)

Query: 3   SMWRTSGWILVGSALILALSLGVRHGFGLFLAPMSSEFGWGRETFAFAIALQNLIWGLAQ 62
           S ++ + W+ +   +I   +LG  + + LF   +S++        AF+  L +L   ++ 
Sbjct: 4   SNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISS 63

Query: 63  PFTGALADRFGATRAVFVGGILYAAGLVLMGMSDSAWSLSLSAGLLIGIGLSGTSFSVIL 122
              G L +RFG  R     GIL   G  L   SD+   L LSAG+L+G+   G  + + L
Sbjct: 64  SVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLA-DGAGYLLTL 122

Query: 123 GVVGRAVAPEKRSMAMGIASAAGSFGQFAMVPGTLGLISWLGWSAALLALGLMVALILPL 182
               +   PE++ +    A  +   G          L+  +G     +  G +  L++  
Sbjct: 123 SNCVKWF-PERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALLMIVF 181

Query: 183 VA-MLKDRPLPVLAGQQTLRE---ALKEACSHSGFWLLAFGFF-VCGFQVVFIGVHLPAY 237
            A ++KD P   +     + E    L E+     +W+LA  F   C   +  IGV     
Sbjct: 182 GATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIA 241

Query: 238 LVDQHLPATVGTTVLALIGLFNIFGTYTAGWLGGRMSKPRLLTGLYLLRAVVIVLFLWAP 297
               HL        + +I + N+ G    G L  ++++ R++T   ++  V +   L+AP
Sbjct: 242 QSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAP 301

Query: 298 VTEVTAYLFGMAMGFLWLSTVPLTNGTVATLFGVRNLSMLGGIVFLFHQLGSFLGGWLGG 357
           +  VT +     + F +  T+ +    V+  FG+ NL+   G+++    LG  +G   G 
Sbjct: 302 LNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIY----LGFGIGSICGS 357

Query: 358 VVYDRTGNYDLIWQVAILLSLLAAALNWPVRE 389
           ++    G + + + V   L +L+ AL+  +R+
Sbjct: 358 IIASLFGGFYVTFYVIFALLILSLALSTTIRQ 389