Pairwise Alignments

Query, 492 a.a., recombinase RmuC from Pseudomonas simiae WCS417

Subject, 495 a.a., DNA recombination limiting inversions protein from Pseudomonas putida KT2440

 Score =  754 bits (1948), Expect = 0.0
 Identities = 395/483 (81%), Positives = 429/483 (88%), Gaps = 4/483 (0%)

Query: 1   MVFDWTSVALGLAGAAVPLLAVCWQLQRRLNARMTGWELLEERLATAQLAQEGLAAQLDA 60
           M  D  S+ LGL   A+P L    Q+QRR  AR     LLEERL  AQLAQ GL AQLDA
Sbjct: 1   MTVDLASILLGLVAGAIPCLVWVMQVQRRQGARQAEQALLEERLNAAQLAQAGLQAQLDA 60

Query: 61  SRDEISDLSQANAAKQADLAAVRREVELLQIDRDNARDAAHAWNLDRSAKETELRRLDAL 120
           SRDE+SDLS+ANA KQA LAA  RE+ELLQIDRDNARDAAHAW+L+R+ +E ELRRL+A 
Sbjct: 61  SRDEVSDLSEANAVKQAQLAAQSRELELLQIDRDNARDAAHAWSLERANREAELRRLEAQ 120

Query: 121 SAALRAELREQQDSHQQRLTDLQGSRDELRAQFAELAGKIFDEREQRFAETSQERLGQLL 180
           +A L AELREQQ+SHQQRL DLQ +RD LRAQFA++A KIFDEREQRFA+TSQ+ LGQLL
Sbjct: 121 TARLDAELREQQESHQQRLEDLQEARDTLRAQFADMATKIFDEREQRFAQTSQQHLGQLL 180

Query: 181 DPLKERIQSFEKRVEESYQNEARERFSLAKELERLQQLNLRLSDEATNLTRALKGQKTQG 240
           DPLKERIQ+FEKRVEESYQ EARERFSL KELERLQQLNLRLSDEATNLT+ALKGQKTQG
Sbjct: 181 DPLKERIQAFEKRVEESYQQEARERFSLGKELERLQQLNLRLSDEATNLTQALKGQKTQG 240

Query: 241 NWGELILERVLEHAGLEKGREYQTQVSLKGPDGERFQPDVLIMLPGDKQVVVDSKVSLTA 300
           NWGELILERVLEHAGLEKGREYQTQVSLK  DGERFQPDVLIMLPGDKQVVVD+KVSLTA
Sbjct: 241 NWGELILERVLEHAGLEKGREYQTQVSLKSADGERFQPDVLIMLPGDKQVVVDAKVSLTA 300

Query: 301 YQQYVAAEDDVIGQAALKQHVLSLRNHVKGLAGKDYKRLEGLHSLDFVLLFVPIEAAFSA 360
           YQQ+VA  D+V    ALKQHV SLR+HVKGL+ KDY RLEGLHSLDFVLLFVPIEAAFSA
Sbjct: 301 YQQFVAGNDEV----ALKQHVQSLRSHVKGLSSKDYSRLEGLHSLDFVLLFVPIEAAFSA 356

Query: 361 ALQAEPNLFQEAFDRHIVIVSPTTLLATLRVIDSLWKQERQSQNAREIAERAGWLYDKFV 420
           ALQAEPNLFQEAFDR IVIVSPTTLLATLRVIDSLWKQERQ QNAREIAERAGWLYDKFV
Sbjct: 357 ALQAEPNLFQEAFDRQIVIVSPTTLLATLRVIDSLWKQERQGQNAREIAERAGWLYDKFV 416

Query: 421 LFIQDLDEVGNRLQQLDKAYSAARNKLTDGRGNLVSRTEQLRLLGARASKSLPADLLERA 480
           LFIQDLDE+G+RLQQ+DKAY+AARNKL +GRGNLVSR+EQL+LLGARASKSLPADLLERA
Sbjct: 417 LFIQDLDELGSRLQQVDKAYAAARNKLCEGRGNLVSRSEQLKLLGARASKSLPADLLERA 476

Query: 481 MTD 483
           ++D
Sbjct: 477 LSD 479