Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 645 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

 Score =  259 bits (661), Expect = 4e-73
 Identities = 140/357 (39%), Positives = 211/357 (59%), Gaps = 2/357 (0%)

Query: 9   LKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSPLIA 68
           L+ +FG+  FR  Q   +  V +G  A  + PTG GKSLC+Q+ A+L   L +VVSPL+A
Sbjct: 5   LQQVFGFPQFRLGQEETVSAVLAGRSAAAIFPTGSGKSLCYQLSAVLLPHLTLVVSPLLA 64

Query: 69  LMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLAFLQ 128
           LM DQ+  L+  G++A S++S  S ++  D+ AR + GE+K+L ++ ERL   R   FLQ
Sbjct: 65  LMQDQLGFLQRHGISAGSIDSAQSRDEANDVMARARSGELKILMISVERLKNERFRNFLQ 124

Query: 129 SLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIVERL 188
           S++I+L  +DEAHC+S+WGH+FR +YL+L      F     + LTATA  +   ++  + 
Sbjct: 125 SVQISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQALLLTATATPKVIADMQAKF 184

Query: 189 HLQNAERFLSSFDRSNIFYRIVPKE--QPRKQLLAFLSERRSDAGIVYCLSRKKVDEVAA 246
            +   +   + F R N+   + P      R++L+ ++SER     IVY   +K  +++A 
Sbjct: 185 AIAPGDVVTTGFYRPNLNLLVEPVSGADKRRRLVQWMSERAGQPSIVYVTLQKTAEQIAE 244

Query: 247 FLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMDLP 306
            L   G  A  YHAGLP+D R   Q+RF++     +VATIAFGMGIDKS++R V H DLP
Sbjct: 245 HLNRNGIQAEAYHAGLPHDKREGIQQRFMSGRSHCIVATIAFGMGIDKSDIRNVVHFDLP 304

Query: 307 KSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDA 363
           KS+E Y QE GRAGRDG P+D  ++     + +L+  +     ++   R    +L A
Sbjct: 305 KSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPEQEGIRRVLEELQA 361



 Score = 43.1 bits (100), Expect = 4e-08
 Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 312 YYQETGRAGRDGLPADAWMVYGLQDV-----VMLKQMLQNSEGDERHKRLEQHKLDAMLS 366
           Y+QE G    +        VY L D      V+ KQ+     G ++H+  E  ++ AML 
Sbjct: 470 YFQEQGLIELESKQMTE--VYSLLDADFDADVLSKQLYT---GFKQHEVGEVARIHAMLD 524

Query: 367 LCEETRCRRQTLLAYF-DEDMPEPCGHCDNC 396
           L    RC  Q L  YF DE+ P+ CGHC  C
Sbjct: 525 LFATERCLGQRLAQYFGDENAPQRCGHCSVC 555