Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 614 a.a., ATP-dependent DNA helicase RecQ from Dickeya dadantii 3937

 Score =  545 bits (1405), Expect = e-159
 Identities = 280/592 (47%), Positives = 397/592 (67%), Gaps = 5/592 (0%)

Query: 5   AQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVS 64
           A +VL++ FGY  FR  Q AII    SG D LV+MPTGGGKSLC+Q+PAL+  GL +VVS
Sbjct: 18  AMQVLRETFGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLEGLTLVVS 77

Query: 65  PLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRML 124
           PLI+LM DQV  L+  GVAAA LNST + EQQ+ + +  +RGE+K+LY+APERL     L
Sbjct: 78  PLISLMKDQVDQLQAYGVAAACLNSTQTREQQQAVFSACRRGELKLLYIAPERLTTDGFL 137

Query: 125 AFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEI 184
             L      L AIDEAHC+SQWGHDFR EY  LGQ+ +  P +P +ALTATAD+ TR++I
Sbjct: 138 EQLTHWNTTLIAIDEAHCISQWGHDFRPEYRALGQIKQQLPALPIVALTATADETTRQDI 197

Query: 185 VERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEV 244
              L L++    +SSFDR NI Y +V K +P  QL  F+  +R  +GIVYC SR KV+++
Sbjct: 198 ARLLDLRDPLINISSFDRPNIRYTLVEKFKPLDQLWLFVQGQRGKSGIVYCNSRAKVEDL 257

Query: 245 AAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMD 304
            A L  +G     YHAGL ND R+  Q+ FL ++  ++VAT+AFGMGI+K NVRFV H D
Sbjct: 258 CARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFD 317

Query: 305 LPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAM 364
           +P+++E+YYQETGRAGRDGLPA+A + Y   D+  L++ L+      +   +E+HKL+AM
Sbjct: 318 IPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAGVQ-LDIERHKLNAM 376

Query: 365 LSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYG 424
            +  E   CRR  LL YF E+  + CG+CD C+D  + +D    A++ LS +YR GQR+G
Sbjct: 377 GAFAEAQTCRRLVLLNYFGENRQQACGNCDVCLDPPRRYDGLVDAQKALSCVYRVGQRFG 436

Query: 425 VGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGFGG 484
           +G++ +VL G +N+++R FGH+KL VYG+GK + + +W S+ RQ++  GL+  +I     
Sbjct: 437 IGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKTQEQWVSILRQLIHLGLLAQNIAHHSA 496

Query: 485 LRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRGE-EREQWEALRTLRRKLA 543
           L+L +S RP+L+G+V L+L     P+  + S    + +   G  +R+ +  LR LR+ +A
Sbjct: 497 LQLTESARPVLRGDVPLQL---AVPRVISLSKPRASQKTYGGNYDRKLFAKLRKLRKSIA 553

Query: 544 QEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVL 595
            E ++PPYV+F D+TLLEM    P + +E+  V+GVG RKLER+G  F+ ++
Sbjct: 554 DEDNIPPYVVFSDATLLEMAELLPVTASELLAVNGVGQRKLERFGTPFMTLI 605