Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 640 a.a., ATP-dependent DNA helicase, RecQ family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  283 bits (723), Expect = 2e-80
 Identities = 156/347 (44%), Positives = 215/347 (61%), Gaps = 1/347 (0%)

Query: 1   MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA 60
           M  +A  VLK +FGYD FR  Q  I+  VA+G D L L+PTGGGKS+CFQVPAL++ G+ 
Sbjct: 1   MKTKALSVLKKVFGYDDFRPMQLDIVLSVAAGKDTLALLPTGGGKSICFQVPALMQEGIC 60

Query: 61  VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ 120
           VVVSPLIALM DQV  L + GV A ++ S +   +          G  K LY++PERL  
Sbjct: 61  VVVSPLIALMKDQVDNLRKRGVLATAIYSGMRKREIDTTLDNCIYGNYKFLYVSPERLKS 120

Query: 121 PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT 180
              +   + +++ + AIDEAHC+SQWG+DFR  YL++  L E  PD P IALTA+A  + 
Sbjct: 121 DLFIERFKRMKVNMVAIDEAHCISQWGYDFRPPYLEIAALREYHPDTPFIALTASATLQV 180

Query: 181 REEIVERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK 240
           +++I+E+L L++   F+ SF R N+ Y +   E   ++ +  L ++   + IVY  SRK 
Sbjct: 181 KQDILEKLALRDPAVFVKSFARKNLSYAVRKAENKLEKAIEIL-QKVGGSAIVYVRSRKA 239

Query: 241 VDEVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV 300
             E+A  L   G  A  YHAGL   LR   Q  + N +  +MVAT AFGMGIDK +VR V
Sbjct: 240 TKELAQALYRLGISATFYHAGLDKQLREQRQMEWKNNKVRVMVATNAFGMGIDKPDVRVV 299

Query: 301 AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNS 347
            H+DLP++LE YYQE GRAGRD   A A ++Y  +D+ +L +  + S
Sbjct: 300 IHVDLPENLENYYQEAGRAGRDEWKAFAVLLYQDKDLEVLVERAEQS 346



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 360 KLDAMLS-LCEETRCRRQTLLAYFDEDMPEPCGHCDNCVD 398
           K  AM++ +   T CR + LLAYF E     CG CD C++
Sbjct: 529 KAKAMVAYVTNTTMCRTRQLLAYFGEVSDTSCGVCDVCLE 568