Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 602 a.a., ATP-dependent DNA helicase from Agrobacterium fabrum C58

 Score =  604 bits (1558), Expect = e-177
 Identities = 298/589 (50%), Positives = 416/589 (70%), Gaps = 2/589 (0%)

Query: 8   VLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSPLI 67
           +LK ++GYD+FRGRQG II+ V +G +A VLMPTGGGKSLC+Q+PAL R G+ +VVSPLI
Sbjct: 8   ILKAVYGYDAFRGRQGEIIQHVVAGNNAFVLMPTGGGKSLCYQIPALAREGMGLVVSPLI 67

Query: 68  ALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLAFL 127
           ALM DQVA L + GV A +LNS LS E++R L   ++ G V +LY APE L++P +L  L
Sbjct: 68  ALMVDQVAALRQAGVRAEALNSDLSPEERRTLWRDVRAGNVDILYAAPETLLKPDVLDAL 127

Query: 128 QSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIVER 187
           QS++++L A+DEAHC+SQWGHDFR  Y QL  L   FP+ PR+ALTATAD+ TR EI+  
Sbjct: 128 QSIDLSLIAVDEAHCLSQWGHDFRPPYRQLDMLIARFPNTPRMALTATADEPTRAEILGH 187

Query: 188 LHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEVAAF 247
           L +  A+ F++ FDR NI Y I+ K+ PR QL  FL+ R +++GIVYCLS++KV+E AA+
Sbjct: 188 LAIDEADAFIAGFDRPNIRYAIMEKDNPRTQLKRFLNGRENESGIVYCLSKRKVEETAAW 247

Query: 248 LCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMDLPK 307
           L E+G  ALPYHAG+    R  +Q RF + E +I+VAT+AFGMGIDK +VRFV H+DLP 
Sbjct: 248 LREEGRDALPYHAGMDKAAREENQTRFQHGEAVIIVATVAFGMGIDKPDVRFVVHIDLPG 307

Query: 308 SLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAMLSL 367
           S+EAYYQETGRAGRDGLP+D  M+YG +D+ +  + ++ S+  ++ K +E+ KLDA+L L
Sbjct: 308 SIEAYYQETGRAGRDGLPSDVLMLYGYEDIALRNRFIEESDAADQRKYMERQKLDALLGL 367

Query: 368 CEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYGVGH 427
            E   CRRQ LL+YF  D  EPCG+CD C      ++    A++ LS IYRTG+R+G  +
Sbjct: 368 AETAGCRRQVLLSYFG-DRCEPCGNCDTCSSPPDLFEGAIAAQKLLSCIYRTGERFGQAY 426

Query: 428 LVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGFGGLRL 487
           ++ VLLG  +E++  FGH+ ++ YG+GK      WR++ RQ+VA  L+++D+ G GGL +
Sbjct: 427 VISVLLGAQDERITKFGHDSITTYGIGKEHDNRTWRAILRQLVALRLIEVDLSGHGGLSI 486

Query: 488 NDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRGE-EREQWEALRTLRRKLAQEH 546
           +++ R  L+ + SL LR    P++T + +   A      E +R  +EALR  R ++A+  
Sbjct: 487 SENGRRFLREKPSLMLRIPSAPRSTRRDAPRNAMSTALPEADRGLFEALRAKRMEIARAQ 546

Query: 547 SVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVL 595
           +VPPYVIF D TL+E+   +P S  EMA+++GVG  KLERYG AFL+ +
Sbjct: 547 NVPPYVIFHDKTLIELAAARPASAKEMAQIAGVGQTKLERYGPAFLDTI 595