Pairwise Alignments

Query, 729 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 382 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 82/322 (25%), Positives = 114/322 (35%), Gaps = 77/322 (23%)

Query: 23  PRPKIGLVLSGGAARGLAHIGVLKALEE-----QGIQIDAIAGTSMGAVIGGLYASGYKI 77
           P P  GL+LSGG AR    +GVL  + E            I GTS GA+     ASG   
Sbjct: 3   PPPVTGLILSGGGARAAYQVGVLAGIAELLPAGADNPFPVIVGTSAGAINAVTLASGAVH 62

Query: 78  DELEKLALSIDWQQALSDAPPREDVPFRRKQDDRDFLVKQKLSFRDDGSLGL----PLGV 133
                  L+  WQ   S    R D P          +V+Q   F     LGL    P+ +
Sbjct: 63  FNDAVQRLTAFWQNFRSHLVIRSDWP---------GVVRQASRFVGHSLLGLGGQAPVAL 113

Query: 134 IQGQNLALLLESM-----FAHSSNTRNFDKLPIPFRAVATDITTGEKVVFRKGH------ 182
           +    L  LL++        H+        + +     A    +G+ V F +G       
Sbjct: 114 LDSSPLRSLLQTHLNLDGIGHALAAEQLRAVAV----TAFGYESGQAVTFYQGRGTIEAW 169

Query: 183 ---------LPQVI---RASMSIPAVFAPVELDGRLLVDGGMTDNIPLDVAREMGVDIAI 230
                     P  I    AS +IP +FAPV+L G    DG +  + P+  A  +G    +
Sbjct: 170 LRHRRIGVPAPLTIDHLLASAAIPLLFAPVQLGGEYYGDGAVRQSAPISPALHLGASRVL 229

Query: 231 VVDI-GTPLRSRKQL----------------------ATVVDVLNQSITLMTRRNSEEQL 267
           VV + G P R    +                      +T +D L   I L+ R N    L
Sbjct: 230 VVGVSGNPQRPAPPVPPQRVFSGQQPSLAQIGGHMLNSTFIDSLEGDIELLQRLNHLSGL 289

Query: 268 KALH---------PKDVLIQPP 280
              H         P DVL+  P
Sbjct: 290 LPAHLDARRLGLAPIDVLVVAP 311